RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 TRIM3O75382 744 aaPredicted RBP13.09□□□□□ -0.31
SMAD6-204ENST00000559931 SERPINA1P01009 418 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 RPS4Y1P22090 263 aaKnown RBP13.09□□□□□ -0.31
SMAD6-204ENST00000559931 GAS1P54826 345 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 CD226Q15762 336 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 ZSWIM7Q19AV6 140 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 EIPR1Q53HC9 387 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 SOWAHCQ53LP3 525 aaPredicted RBP13.09□□□□□ -0.31
SMAD6-204ENST00000559931 CYBRD1Q53TN4 286 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 MRPL2Q5T653 305 aaKnown RBP13.09□□□□□ -0.31
SMAD6-204ENST00000559931 TIGD3Q6B0B8 471 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 YTHDF3Q7Z739 585 aaKnown RBP13.09□□□□□ -0.31
SMAD6-204ENST00000559931 DHFR2Q86XF0 187 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 PLCZ1Q86YW0 608 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 CMIPQ8IY22 773 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 CLIP4Q8N3C7 705 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 CNOT9Q92600 299 aaKnown RBP13.09□□□□□ -0.31
SMAD6-204ENST00000559931 PROX1Q92786 737 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 TAMM41Q96BW9 452 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 TMEM41AQ96HV5 264 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 NSMCE2Q96MF7 247 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 GNRHR2Q96P88 292 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 PINK1Q9BXM7 581 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 PTGES2Q9H7Z7 377 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 ZFP64Q9NPA5 681 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 B4GALT7Q9UBV7 327 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 FREM3P0C091 2139 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 C17orf51A8MQB3 221 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 FAM166BA8MTA8 275 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 FAM47E-STBD1D6RA91 191 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 ACOT7O00154 380 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 SNPHO15079 494 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 ARPC2O15144 300 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 TPST1O60507 370 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 EIF4E2O60573 245 aaKnown RBP13.08□□□□□ -0.32
SMAD6-204ENST00000559931 CBR3O75828 277 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 CIB2O75838 187 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 TRAPPC6AO75865 159 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 PRB1P04280 392 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 ELAVL4P26378 380 aaKnown RBP13.08□□□□□ -0.32
SMAD6-204ENST00000559931 MSX1P28360 303 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 RYKP34925 604 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 ADH7P40394 386 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 PPIAP62937 165 aaKnown RBP13.08□□□□□ -0.32
SMAD6-204ENST00000559931 EEF1A1P68104 462 aaKnown RBP13.08□□□□□ -0.32
SMAD6-204ENST00000559931 PMP22Q01453 160 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 ZNF117Q03924 483 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 PGM2L1Q6PCE3 622 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 DHRS4L2Q6PKH6 230 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 CYP2R1Q6VVX0 501 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 FKBP9P1Q75LS8 142 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 ASRGL1Q7L266 308 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 SLC22A16Q86VW1 577 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 SPPL2CQ8IUH8 684 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 OR10Q1Q8NGQ4 319 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 RNF138Q8WVD3 245 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 DTNBP1Q96EV8 351 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 FRMD6Q96NE9 622 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 LAT2Q9GZY6 243 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 MUC13Q9H3R2 512 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 GORASP2Q9H8Y8 452 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 ACTR3BQ9P1U1 418 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 RPS6KA6Q9UK32 745 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 BAG5Q9UL15 447 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 HEATR5AQ86XA9 2040 aa13.08□□□□□ -0.32
SMAD6-204ENST00000559931 CDHR4A6H8M9 788 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 EIF4E1BA6NMX2 242 aaKnown RBP13.07□□□□□ -0.32
SMAD6-204ENST00000559931 TFECO14948 347 aaPredicted RBP13.07□□□□□ -0.32
SMAD6-204ENST00000559931 OIP5O43482 229 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 CDC40O60508 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMAD6-204ENST00000559931 GKN3PP0CG01 181 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 GDF1P27539 372 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 KCNJ5P48544 419 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 P2RX1P51575 399 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 SELENOWP63302 87 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 MS4A2Q01362 244 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 ALDH6A1Q02252 535 aaKnown RBP13.07□□□□□ -0.32
SMAD6-204ENST00000559931 FOXO1Q12778 655 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 TRAP1Q12931 704 aaKnown RBP13.07□□□□□ -0.32
SMAD6-204ENST00000559931 NFATC3Q12968 1075 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 DUSP7Q16829 419 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 RNF220Q5VTB9 566 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 FNDC7Q5VTL7 733 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 RPUSD3Q6P087 351 aaKnown RBP13.07□□□□□ -0.32
SMAD6-204ENST00000559931 CBLN3Q6UW01 205 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 ZNF440Q8IYI8 595 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 CISD2Q8N5K1 135 aaKnown RBP13.07□□□□□ -0.32
SMAD6-204ENST00000559931 ZFP62Q8NB50 900 aaPredicted RBP13.07□□□□□ -0.32
SMAD6-204ENST00000559931 TOR1AIP2Q8NFQ8 470 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 OR2M3Q8NG83 312 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 ASB9Q96DX5 294 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 TTTY12Q9BZ98 90 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 TRIM15Q9C019 465 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 DKKL1Q9UK85 242 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 FBXL2Q9UKC9 423 aa13.07□□□□□ -0.32
SMAD6-204ENST00000559931 SH3GLB1Q9Y371 365 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms