RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 CSNK1G3Q9Y6M4 447 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 NPIPA5E9PKD4 350 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 F10P00742 488 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 IGHV4-34P06331 123 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 FRMPD2BQ6IN97 320 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 KLHL24Q6TFL4 600 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 SPATC1Q76KD6 591 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 LINC00471Q8N535 108 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 TOR1AIP2Q8NFQ8 470 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 OR10H4Q8NGA5 316 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 STT3BQ8TCJ2 826 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 C16orf58Q96GQ5 468 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 SENP5Q96HI0 755 aaPredicted RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 NEURL2Q9BR09 285 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 NPIPA1Q9UND3 350 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 HOXC4P09017 264 aaPredicted RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 ICAM2P13598 275 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 SYPL1Q16563 259 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 SMN1Q16637 294 aaKnown RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 PROX2Q3B8N5 592 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 RUNDC3AQ59EK9 446 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 STEAP3Q658P3 488 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 NLGN4YQ8NFZ3 816 aaPredicted RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 OR7G1Q8NGA0 311 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 SNAPC3Q92966 411 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 FEVQ99581 238 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 SPATA9Q9BWV2 254 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 RBM38Q9H0Z9 239 aaKnown RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 SLA2Q9H6Q3 261 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 TMEM185BQ9H7F4 350 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 CENPMQ9NSP4 180 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 TMEM45AQ9NWC5 275 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 TRAV6A0A075B6T7 132 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 VSTM2BA6NLU5 285 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 M0R3H8 397 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 CSO75390 466 aaKnown RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 IL33O95760 270 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 PEPDP12955 493 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 STOMP27105 288 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 UQCRC1P31930 480 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 FOXC1Q12948 553 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 ALG10BQ5I7T1 473 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SHQ1Q6PI26 577 aaKnown RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 LINC00696Q6ZRV3 163 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 Q8N402 240 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 PARP16Q8N5Y8 322 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 ZNF433Q8N7K0 673 aaPredicted RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 TCEANCQ8N8B7 351 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 NUDT8Q8WV74 236 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 GPN1Q9HCN4 374 aaPredicted RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 NLKQ9UBE8 527 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 UGT2A1Q9Y4X1 527 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 IGHV1OR21-1A0A087WYE8 117 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 A0A1B0GTL3 188 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 IDSB3KWA1 339 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 ACOT7O00154 380 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 RRP8O43159 456 aaKnown RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 RNF13O43567 381 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SYNGR4O95473 234 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SBK3P0C264 359 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 ADORA3P0DMS8 318 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 LIM2P55344 173 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 RHAGQ02094 409 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SRYQ05066 204 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 CRYZQ08257 329 aaKnown RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 PUDPQ08623 228 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SLC48A1Q6P1K1 146 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 OPN5Q6U736 354 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 C6orf15Q6UXA7 325 aaPredicted RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 DGLUCYQ7Z3D6 616 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 TMEM80Q96HE8 168 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 GLIPR2Q9H4G4 154 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 MAGIXQ9H6Y5 334 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SVILO95425 2214 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 ANKRD34BA5PLL1 514 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 AKAP8O43823 692 aaKnown RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 TMPRSS11DO60235 418 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 C21orf33P30042 268 aaPredicted RBP9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SSTR4P31391 388 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 EMP3P54852 163 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 HOXC5Q00444 222 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SPHARQ15513 63 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 DCST2Q5T1A1 773 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 PRAMEF17Q5VTA0 474 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 FUNDC1Q8IVP5 155 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 OR14A16Q8NHC5 309 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 OR7D2Q96RA2 312 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 TBX5Q99593 518 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 TMED9Q9BVK6 235 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 SPNS1Q9H2V7 528 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 BEX1Q9HBH7 125 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 ACOT13Q9NPJ3 140 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 THSD1Q9NS62 852 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 MLXQ9UH92 298 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 FBXO4Q9UKT5 387 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 ABCG2Q9UNQ0 655 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 TMEM5Q9Y2B1 443 aa9.94□□□□□ -0.82
CARMIL3-202ENST00000559694 A0A1W2PR48 441 aa9.93□□□□□ -0.82
CARMIL3-202ENST00000559694 MEIOCA2RUB1 952 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms