RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 EXOC3L2Q2M3D2 409 aa15.2■□□□□ 0.02
TPM1-219ENST00000559397 TTC23Q5W5X9 447 aa15.2■□□□□ 0.02
TPM1-219ENST00000559397 PEX5LQ8IYB4 626 aa15.2■□□□□ 0.02
TPM1-219ENST00000559397 PIK3C3Q8NEB9 887 aa15.2■□□□□ 0.02
TPM1-219ENST00000559397 OR6T1Q8NGN1 323 aa15.2■□□□□ 0.02
TPM1-219ENST00000559397 HSPBAP1Q96EW2 488 aa15.2■□□□□ 0.02
TPM1-219ENST00000559397 NMNAT1Q9HAN9 279 aaPredicted RBP15.2■□□□□ 0.02
TPM1-219ENST00000559397 FBXO34Q9NWN3 711 aa15.2■□□□□ 0.02
TPM1-219ENST00000559397 A4GNTQ9UNA3 340 aa15.2■□□□□ 0.02
TPM1-219ENST00000559397 ZNF443Q9Y2A4 671 aaPredicted RBP15.2■□□□□ 0.02
TPM1-219ENST00000559397 ARRDC5A6NEK1 342 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 A6NL46 340 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 E9PQ18 207 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 SLC16A6O15403 523 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 ITGA10O75578 1167 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 OR2J2O76002 312 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 KCNK2O95069 426 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 EEF1A1P68104 462 aaKnown RBP15.19■□□□□ 0.02
TPM1-219ENST00000559397 NPTX1Q15818 432 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 MEP1AQ16819 746 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 COLEC12Q5KU26 742 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 LYPD8Q6UX82 237 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 FDCSPQ8NFU4 85 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 OR10G2Q8NGC3 310 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 PHF10Q8WUB8 498 aaKnown RBP15.19■□□□□ 0.02
TPM1-219ENST00000559397 LMF1Q96S06 567 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 RASL10BQ96S79 203 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 FUZQ9BT04 418 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 ZNF552Q9H707 407 aaPredicted RBP15.19■□□□□ 0.02
TPM1-219ENST00000559397 ZNF696Q9H7X3 374 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 Q9N2J8 555 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 PNPLA3Q9NST1 481 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 GPR83Q9NYM4 423 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 ZNF232Q9UNY5 417 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 ORC6Q9Y5N6 252 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 MITFO75030 526 aaPredicted RBP15.19■□□□□ 0.02
TPM1-219ENST00000559397 DBIP07108 87 aaKnown RBP15.19■□□□□ 0.02
TPM1-219ENST00000559397 SMIM11AP58511 58 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 RAPSNQ13702 412 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 GANABQ14697 944 aaKnown RBP15.19■□□□□ 0.02
TPM1-219ENST00000559397 LARS2Q15031 903 aaKnown RBP15.19■□□□□ 0.02
TPM1-219ENST00000559397 MAPK14Q16539 360 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 KRT80Q6KB66 452 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 TMEM154Q6P9G4 183 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 DEF8Q6ZN54 512 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 CLIP4Q8N3C7 705 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 ATG16L2Q8NAA4 619 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 OR52J3Q8NH60 311 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 BATF3Q9NR55 127 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 SCOCQ9UIL1 159 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 KCNE5Q9UJ90 142 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 CBLCQ9ULV8 474 aa15.19■□□□□ 0.02
TPM1-219ENST00000559397 YARS2Q9Y2Z4 477 aaKnown RBP15.19■□□□□ 0.02
TPM1-219ENST00000559397 CENPVL1A0A0U1RR11 272 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 EIF4E1BA6NMX2 242 aaKnown RBP15.18■□□□□ 0.02
TPM1-219ENST00000559397 TNFAIP8O95379 198 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 CLIC3O95833 236 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 H1F0P07305 194 aaKnown RBP15.18■□□□□ 0.02
TPM1-219ENST00000559397 ANXA8P13928 327 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 ABCD3P28288 659 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 PIGAP37287 484 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 PSPHP78330 225 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 GPR68Q15743 365 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 TBR1Q16650 682 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 ACER2Q5QJU3 275 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 ZNF770Q6IQ21 691 aaPredicted RBP15.18■□□□□ 0.02
TPM1-219ENST00000559397 BORAQ6PGQ7 559 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 FIGNL1Q6PIW4 674 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 ZNF836Q6ZNA1 936 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 TSPYL5Q86VY4 417 aaPredicted RBP15.18■□□□□ 0.02
TPM1-219ENST00000559397 TAGAPQ8N103 731 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 SLC15A4Q8N697 577 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 NR4A3Q92570 626 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 RMND5BQ96G75 393 aaPredicted RBP15.18■□□□□ 0.02
TPM1-219ENST00000559397 PRRC1Q96M27 445 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 ALPK1Q96QP1 1244 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 FEVQ99581 238 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 CACYBPQ9HB71 228 aaKnown RBP15.18■□□□□ 0.02
TPM1-219ENST00000559397 KLHL28Q9NXS3 571 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 RHCGQ9UBD6 479 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 SLC13A4Q9UKG4 626 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 OR10H1Q9Y4A9 318 aa15.18■□□□□ 0.02
TPM1-219ENST00000559397 A0A1W2PRQ8 180 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 TPST2O60704 377 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 IGKV1D-16P01601 117 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 NID1P14543 1247 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 IL7RP16871 459 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 CBLP22681 906 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 DGCR6Q14129 220 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 LIN52Q52LA3 116 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 RNF220Q5VTB9 566 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 AGAP7PQ5VUJ5 663 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 ZAR1Q86SH2 424 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 PRR22Q8IZ63 422 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 SLC34A3Q8N130 599 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 BCORP1Q8N888 145 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 ZNF555Q8NEP9 628 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 SLC22A8Q8TCC7 542 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 CRELD1Q96HD1 420 aa15.17■□□□□ 0.02
TPM1-219ENST00000559397 MUS81Q96NY9 551 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms