RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ALG2Q9H553 416 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 PTGES2Q9H7Z7 377 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 CACYBPQ9HB71 228 aaKnown RBP19.71■□□□□ 0.75
SNX1-206ENST00000559389 TMEM181Q9P2C4 612 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 GMPR2Q9P2T1 348 aaKnown RBP19.71■□□□□ 0.75
SNX1-206ENST00000559389 SEC14L3Q9UDX4 400 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 DKKL1Q9UK85 242 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 ICAM5Q9UMF0 924 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 CARD8Q9Y2G2 431 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 IFT52Q9Y366 437 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 GTPBP1O00178 669 aaKnown RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 EIF4E2O60573 245 aaKnown RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 DNAJA2O60884 412 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 GCM2O75603 506 aaPredicted RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 PABPC4LP0CB38 370 aaKnown RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 DPP4P27487 766 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 CPOXP36551 454 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 GSK3BP49841 420 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 P2RX1P51575 399 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 DSCR4P56555 118 aaPredicted RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 EEF1A1P68104 462 aaKnown RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 CBX1P83916 185 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 VEZF1Q14119 521 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 SLC10A1Q14973 349 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 KRTCAP3Q53RY4 240 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 INTS11Q5TA45 600 aaKnown RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 SPPL2CQ8IUH8 684 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 MICU2Q8IYU8 434 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 GHDCQ8N2G8 530 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 RBM15BQ8NDT2 890 aaKnown RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 ST6GALNAC3Q8NDV1 305 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 FAM83FQ8NEG4 500 aaPredicted RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 TOR1AIP2Q8NFQ8 470 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 SPATA5L1Q9BVQ7 753 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 LAT2Q9GZY6 243 aa19.7■□□□□ 0.74
SNX1-206ENST00000559389 EXOSC3Q9NQT5 275 aaKnown RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 DNAJB12Q9NXW2 375 aaKnown RBP19.7■□□□□ 0.74
SNX1-206ENST00000559389 ANKUB1A6NFN9 424 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 B2RBV5 119 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 GMFGO60234 142 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 CDC40O60508 579 aaKnown RBP eCLIP19.69■□□□□ 0.742e-6■■■■■ 31.7
SNX1-206ENST00000559389 TRAPPC6AO75865 159 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 PDE9AO76083 593 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 UBTFL6P0CB48 400 aaPredicted RBP19.69■□□□□ 0.74
SNX1-206ENST00000559389 FOXK1P85037 733 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 LARS2Q15031 903 aaKnown RBP19.69■□□□□ 0.74
SNX1-206ENST00000559389 TOMM20Q15388 145 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 CCDC80Q76M96 950 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 TRILQ7L0X0 811 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 IFNEQ86WN2 208 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 CHERPQ8IWX8 916 aaKnown RBP19.69■□□□□ 0.74
SNX1-206ENST00000559389 TMCO5AQ8N6Q1 288 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 ARSGQ96EG1 525 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 ZNF607Q96SK3 696 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 ADA2Q9NZK5 511 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 MRPS18CQ9Y3D5 142 aaKnown RBP19.69■□□□□ 0.74
SNX1-206ENST00000559389 CHST2Q9Y4C5 530 aa19.69■□□□□ 0.74
SNX1-206ENST00000559389 TRGV5A0A0B4J1U4 118 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 ELOVL7A1L3X0 281 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 CDHR4A6H8M9 788 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 HCN1O60741 890 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 MFN2O95140 757 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 PRKAR1BP31321 381 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 HSF1Q00613 529 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 ZSWIM7Q19AV6 140 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 EIPR1Q53HC9 387 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 ZNF311Q5JNZ3 666 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 WIPI1Q5MNZ9 446 aaPredicted RBP19.68■□□□□ 0.74
SNX1-206ENST00000559389 DHRS4L2Q6PKH6 230 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 ARSKQ6UWY0 536 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 RINLQ6ZS11 566 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 PATL1Q86TB9 770 aaKnown RBP19.68■□□□□ 0.74
SNX1-206ENST00000559389 YRDCQ86U90 279 aaKnown RBP19.68■□□□□ 0.74
SNX1-206ENST00000559389 DEFB107AQ8IZN7 70 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 OR5W2Q8NH69 310 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 CNOT9Q92600 299 aaKnown RBP19.68■□□□□ 0.74
SNX1-206ENST00000559389 RSPO3Q9BXY4 272 aaPredicted RBP19.68■□□□□ 0.74
SNX1-206ENST00000559389 TAS2R10Q9NYW0 307 aa19.68■□□□□ 0.74
SNX1-206ENST00000559389 A0A1B0GVC2 190 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 PRORSD1PA6NEY8 169 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 SUSD5O60279 629 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 ZIC3O60481 467 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 SERPINB7O75635 380 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 CYP7B1O75881 506 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 HK1P19367 917 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 CCR4P51679 360 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 ZNF41P51814 821 aaPredicted RBP19.67■□□□□ 0.74
SNX1-206ENST00000559389 CRYBA2P53672 197 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 PLPPR5Q32ZL2 321 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 C6orf89Q6UWU4 347 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 GFRALQ6UXV0 394 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 FGD2Q7Z6J4 655 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 GRAMD2AQ8IUY3 354 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 GALNT11Q8NCW6 608 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 OR14L1PQ8NHC6 308 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 NEIL3Q8TAT5 605 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 KCTD14Q9BQ13 255 aaPredicted RBP19.67■□□□□ 0.74
SNX1-206ENST00000559389 LDAHQ9H6V9 325 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 MED17Q9NVC6 651 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 RLIMQ9NVW2 624 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms