RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ARL2BPQ9Y2Y0 163 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 MRPS18CQ9Y3D5 142 aaKnown RBP10.36□□□□□ -0.75
SNX1-204ENST00000559061 FAM215AQ9Y5M1 114 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 WIPF3A6NGB9 483 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 TMEM229AB2RXF0 380 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 NPIPA2E9PIF3 369 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 NPIPA3F8WFD2 350 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 ETV2O00321 342 aaPredicted RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 TRAPPC6AO75865 159 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 NR2F1P10589 423 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 PTGS2P35354 604 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 STARP49675 285 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 LHX2P50458 406 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 DSCR4P56555 118 aaPredicted RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 CLDN18P56856 261 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 PCBP3P57721 371 aaKnown RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 EEF1A1P68104 462 aaKnown RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 ADORA2A-AS1P86434 159 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 CDSNQ15517 529 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 ATAD3BQ5T9A4 648 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 ARHGAP11AQ6P4F7 1023 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 PLXDC2Q6UX71 529 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 ZNF836Q6ZNA1 936 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 MTERF4Q7Z6M4 381 aaKnown RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 FITM2Q8N6M3 262 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 ZNF614Q8N883 585 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 OR4K17Q8NGC6 315 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 OR5M9Q8NGP3 310 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 B4GALNT2Q8NHY0 566 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 RP9Q8TA86 221 aaKnown RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 PHOSPHO1Q8TCT1 267 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 GPR119Q8TDV5 335 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 CNOT9Q92600 299 aaKnown RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 WDYHV1Q96HA8 205 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 DMRTA2Q96SC8 542 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 TIMP4Q99727 224 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 WFDC6Q9BQY6 131 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 HOXD1Q9GZZ0 328 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 TMEM38AQ9H6F2 299 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 MED17Q9NVC6 651 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 RLIMQ9NVW2 624 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 CMTM6Q9NX76 183 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 DNAJB12Q9NXW2 375 aaKnown RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 SUCOQ9UBS9 1254 aaKnown RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 RPH3AQ9Y2J0 694 aaPredicted RBP10.35□□□□□ -0.75
SNX1-204ENST00000559061 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
SNX1-204ENST00000559061 RP1L1Q8IWN7 2480 aaPredicted RBP10.34□□□□□ -0.75
SNX1-204ENST00000559061 MYO7BQ6PIF6 2116 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 OR2M5A3KFT3 312 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 C7orf72A4D263 438 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 OR14I1A6ND48 311 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 H0YC42 278 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 AP3D1O14617 1153 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 HCRTR2O43614 444 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 TPST1O60507 370 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 PGM3O95394 542 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 LDLRP01130 860 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 UBL4AP11441 157 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 HK1P19367 917 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 PPIBP23284 216 aaKnown RBP10.34□□□□□ -0.75
SNX1-204ENST00000559061 SHC1P29353 583 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 CPA2P48052 419 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 TPD52P55327 224 aaPredicted RBP10.34□□□□□ -0.75
SNX1-204ENST00000559061 DLX5P56178 289 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 CDK6Q00534 326 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 FOXF1Q12946 379 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 MAPRE2Q15555 327 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 ZNF630Q2M218 657 aaPredicted RBP10.34□□□□□ -0.75
SNX1-204ENST00000559061 GXYLT1Q4G148 440 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 GLIPR1L2Q4G1C9 344 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 C4orf17Q53FE4 359 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 MRPL2Q5T653 305 aaKnown RBP10.34□□□□□ -0.75
SNX1-204ENST00000559061 GGNQ86UU5 652 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 MISPQ8IVT2 679 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 CLIP4Q8N3C7 705 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 OR8J3Q8NGG0 315 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 OR10A6Q8NH74 314 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 OR14L1PQ8NHC6 308 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 OIT3Q8WWZ8 545 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 ZNF583Q96ND8 569 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 PRDM14Q9GZV8 571 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 LAT2Q9GZY6 243 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 MRGBPQ9NV56 204 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 SH3BGRL2Q9UJC5 107 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 DKKL1Q9UK85 242 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 VDAC3Q9Y277 283 aa10.34□□□□□ -0.75
SNX1-204ENST00000559061 ZNF443Q9Y2A4 671 aaPredicted RBP10.34□□□□□ -0.75
SNX1-204ENST00000559061 GPC6Q9Y625 555 aaPredicted RBP10.34□□□□□ -0.75
SNX1-204ENST00000559061 DOCK7Q96N67 2140 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 C15orf38-AP3S2A0A0A6YYH1 394 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 TRGV8A0A0C4DH27 118 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 CDHR4A6H8M9 788 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 CCT8L1PA6NM43 557 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 NME4O00746 187 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 AIM2O14862 343 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 ZNF264O43296 627 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 LRRTM2O43300 516 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 TOXO94900 526 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 TPOP07202 933 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 UBTFL6P0CB48 400 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms