RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 TRHRP34981 398 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-230ENST00000557427 BUD31P41223 144 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-230ENST00000557427 STT3AP46977 705 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 SSR4P51571 173 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 ARFIP1P53367 373 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 TNFRSF17Q02223 184 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 SLC25A35Q3KQZ1 300 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 ZNF385BQ569K4 471 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 CCNYL2Q5T2Q4 361 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 ENPP6Q6UWR7 440 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 IL20RBQ6UXL0 311 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 MDGA2Q7Z553 956 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 WDR53Q7Z5U6 358 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-230ENST00000557427 CARM1Q86X55 608 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 NUDT13Q86X67 352 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 ZFP62Q8NB50 900 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-230ENST00000557427 OR4A15Q8NGL6 344 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 FBXO30Q8TB52 745 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 SLC2A12Q8TD20 617 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 SENP5Q96HI0 755 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-230ENST00000557427 CNBD2Q96M20 576 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 Q96MF0 132 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 ANKRD60Q9BZ19 345 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 ZNF696Q9H7X3 374 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 LYARQ9NX58 379 aaKnown RBP11.43□□□□□ -0.58
SHMT2-230ENST00000557427 UBAP1Q9NZ09 502 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 DNAJB9Q9UBS3 223 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 OAZ3Q9UMX2 235 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 PCDHGB4Q9UN71 923 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 ERVK-11Q9UQG0 969 aa11.43□□□□□ -0.58
SHMT2-230ENST00000557427 YARS2Q9Y2Z4 477 aaKnown RBP11.43□□□□□ -0.58
SHMT2-230ENST00000557427 RNF103-CHMP3A0A140T963 221 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 TRIM64A6NGJ6 449 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 TRIM64BA6NI03 449 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 HRKO00198 91 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 UPK1AO00322 258 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 DLGAP1O14490 977 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 OR10H2O60403 315 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 PRKD3O94806 890 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 AIFM1O95831 613 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 HPRP00739 348 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 SERPINA1P01009 418 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 UQCRC1P31930 480 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 TRA2BP62995 288 aaKnown RBP11.42□□□□□ -0.58
SHMT2-230ENST00000557427 RNF4P78317 190 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 ZNF267Q14586 743 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-230ENST00000557427 ZNF750Q32MQ0 723 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 MRM1Q6IN84 353 aaKnown RBP11.42□□□□□ -0.58
SHMT2-230ENST00000557427 ZNF585AQ6P3V2 769 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 PTOV1Q86YD1 416 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 CYP4Z2PQ8N1L4 340 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 TRIML2Q8N7C3 387 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 FAM86B1Q8N7N1 296 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 ZNF721Q8TF20 911 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 TFAP2CQ92754 450 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 PYURFQ96I23 114 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 RAD21L1Q9H4I0 556 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 NTN4Q9HB63 628 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 MYOTQ9UBF9 498 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 RPS6KA6Q9UK32 745 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 V9GYQ6 96 aa11.42□□□□□ -0.58
SHMT2-230ENST00000557427 ARID1AO14497 2285 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 PINLYPA6NC86 204 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 SYNDIG1LA6NDD5 238 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 A8MVJ9 347 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 PDLIM1O00151 329 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 DYRK3O43781 588 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 OR6B1O95007 311 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 IL3P08700 152 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 NR2F6P10588 404 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 ZNF23P17027 643 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 DDCP20711 480 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 KDELR2P33947 212 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 PCGF2P35227 344 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 MAGEA2P43356 314 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 MAPK12P53778 367 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 GPR85P60893 370 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 IGLV3-21P80748 117 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-230ENST00000557427 MYBPC1Q00872 1141 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 FADDQ13158 208 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 BIKQ13323 160 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 GAB1Q13480 694 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 RGNQ15493 299 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 B3GNT6Q6ZMB0 384 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 ARMC10Q8N2F6 343 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 SVOPLQ8N434 492 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 RELL2Q8NC24 303 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-230ENST00000557427 OR5L2Q8NGL0 311 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 ASB15Q8WXK1 588 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 RIT1Q92963 219 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 TMBIM1Q969X1 311 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 TM4SF18Q96CE8 201 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 RDH12Q96NR8 316 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 CNPPD1Q9BV87 410 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 TIMMDC1Q9NPL8 285 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 MIEF1Q9NQG6 463 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 HPF1Q9NWY4 346 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 TEX10Q9NXF1 929 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-230ENST00000557427 SMPD3Q9NY59 655 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms