RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 MUCL1Q96DR8 90 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 FOXN4Q96NZ1 517 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 BBS4Q96RK4 519 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 PSD2Q9BQI7 771 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 GIMAP4Q9NUV9 329 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 NMRK1Q9NWW6 199 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 SNX6Q9UNH7 406 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 MGAM2Q2M2H8 2515 aa11.04□□□□□ -0.64
PSEN1-221ENST00000557293 IGHV3-15A0A0B4J1V0 119 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 GOLGA6L6A8MZA4 724 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 ZNF195O14628 629 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 OIP5O43482 229 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 RGS14O43566 566 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 PCDH7O60245 1069 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 NKX2-2O95096 273 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 VENTXO95231 258 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 APEHP13798 732 aaKnown RBP11.03□□□□□ -0.64
PSEN1-221ENST00000557293 HSD3B1P14060 373 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 PTAFRP25105 342 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 HSD3B2P26439 372 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 PRIM2P49643 509 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 HTR6P50406 440 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 NCBP2P52298 156 aaKnown RBP eCLIP11.03□□□□□ -0.642e-8■■□□□ 11.9
PSEN1-221ENST00000557293 PSMD4P55036 377 aaKnown RBP11.03□□□□□ -0.64
PSEN1-221ENST00000557293 HEPACAMQ14CZ8 416 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 CD226Q15762 336 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 TMEM176BQ3YBM2 270 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-221ENST00000557293 GLE1Q53GS7 698 aaKnown RBP11.03□□□□□ -0.64
PSEN1-221ENST00000557293 ZNF544Q6NX49 715 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 SLC22A25Q6T423 547 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 CDYL2Q8N8U2 506 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 OR2W6PQ8NHA6 318 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 SH3YL1Q96HL8 342 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-221ENST00000557293 REXO5Q96IC2 774 aaKnown RBP11.03□□□□□ -0.64
PSEN1-221ENST00000557293 AMDHD1Q96NU7 426 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 C1QTNF3Q9BXJ4 246 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 ACPTQ9BZG2 426 aa11.03□□□□□ -0.64
PSEN1-221ENST00000557293 MRTO4Q9UKD2 239 aaKnown RBP11.03□□□□□ -0.64
PSEN1-221ENST00000557293 GNG14A0A1W2PPG7 69 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 SMAD9O15198 467 aaKnown RBP11.02□□□□□ -0.65
PSEN1-221ENST00000557293 KIAA0513O60268 411 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 OTCP00480 354 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 DHRS4L1P0CG22 281 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 TCP1P17987 556 aaKnown RBP11.02□□□□□ -0.65
PSEN1-221ENST00000557293 GGT1P19440 569 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 DDCP20711 480 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 HNF1AP20823 631 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 ME2P23368 584 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 TIA1P31483 386 aaKnown RBP eCLIP11.02□□□□□ -0.65
PSEN1-221ENST00000557293 HSD17B3P37058 310 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 PDLIM4P50479 330 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 ZNF83P51522 516 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 ZNF41P51814 821 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-221ENST00000557293 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-221ENST00000557293 C2orf80Q0P641 193 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 FOXF1Q12946 379 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 NAB1Q13506 487 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 SLC29A2Q14542 456 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 TOMM34Q15785 309 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-221ENST00000557293 FAM71E1Q6IPT2 247 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 KLC3Q6P597 504 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 SLC43A2Q8N370 569 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 FBXO27Q8NI29 283 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 SORCS2Q96PQ0 1159 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 ZNF300Q96RE9 604 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-221ENST00000557293 DPH5Q9H2P9 285 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 TIGARQ9NQ88 270 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 SIRT5Q9NXA8 310 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 SENP1Q9P0U3 644 aa11.02□□□□□ -0.65
PSEN1-221ENST00000557293 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 A0A1W2PR80 420 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 TTC36A6NLP5 189 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 NDUFS8O00217 210 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 SLITRK5O94991 958 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 KCNH1O95259 989 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 RBP1P09455 135 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 ANXA4P09525 319 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-221ENST00000557293 ZNF23P17027 643 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 ELK4P28324 431 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 TYK2P29597 1187 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 NTF4P34130 210 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 MAGEA4P43358 317 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 COMPP49747 757 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-221ENST00000557293 ZNHIT3Q15649 155 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-221ENST00000557293 ZSWIM7Q19AV6 140 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 ARL13AQ5H913 290 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-221ENST00000557293 EXOSC6Q5RKV6 272 aaKnown RBP11.01□□□□□ -0.65
PSEN1-221ENST00000557293 TMEM108Q6UXF1 575 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 SSX8Q7RTT4 187 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 WDR31Q8NA23 367 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 OR52N5Q8NH56 324 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 B4GALNT2Q8NHY0 566 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 C3orf49Q96BT1 292 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 MRRFQ96E11 262 aaKnown RBP11.01□□□□□ -0.65
PSEN1-221ENST00000557293 GIMAP5Q96F15 307 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 ERP44Q9BS26 406 aa11.01□□□□□ -0.65
PSEN1-221ENST00000557293 INPP5KQ9BT40 448 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms