RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 CD79BP40259 229 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 NCBP2P52298 156 aaKnown RBP eCLIP9.65□□□□□ -0.866e-71■■■□□ 15.1
HNRNPC-230ENST00000557201 PNLIPRP2P54317 469 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 STX1BP61266 288 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 PSPHP78330 225 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 PSG6Q00889 435 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 SQLEQ14534 574 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 ACKR1Q16570 336 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 C22orf34Q6ZV56 151 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 PIGWQ7Z7B1 504 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 OR4N2Q8NGD1 307 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 OR9A2Q8NGT5 310 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 NUDT8Q8WV74 236 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 FIG4Q92562 907 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 KAT2AQ92830 837 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 PIGTQ969N2 578 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 CIDECQ96AQ7 238 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 ZBTB18Q99592 522 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 ELAC2Q9BQ52 826 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 DUSP26Q9BV47 211 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 GLIPR2Q9H4G4 154 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 ZNF385DQ9H6B1 395 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 FOLH1BQ9HBA9 442 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 KLHL28Q9NXS3 571 aa9.65□□□□□ -0.86
HNRNPC-230ENST00000557201 A0A087WV62 115 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 FAM234BA2RU67 622 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 SLC22A20A6NK97 555 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 H0YC42 278 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 H7C1Q1 480 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 RNASET2O00584 256 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 EMC8O43402 210 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 FADS1O60427 444 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 SMPD2O60906 423 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 SCN2BO60939 215 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 PGRP06401 933 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 PEPDP12955 493 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 NCF2P19878 526 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 S100A3P33764 101 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 EVI2BP34910 448 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 SUCLG1P53597 346 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 MANFP55145 182 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 TPD52P55327 224 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 DSCR4P56555 118 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 NME5P56597 212 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 PHC1P78364 1004 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 LRRC74AQ0VAA2 488 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 PGS1Q32NB8 556 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 FAM174BQ3ZCQ3 159 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 SPANXN4Q5MJ08 99 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 ANXA8L1Q5VT79 327 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 OR2A2Q6IF42 318 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 BLOC1S3Q6QNY0 202 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 VPS37AQ8NEZ2 397 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 OR2M3Q8NG83 312 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 OR7G2Q8NG99 324 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 ZFP28Q8NHY6 868 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 OR5P2Q8WZ92 322 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 DTNBP1Q96EV8 351 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 Q96MF0 132 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 CCT8L2Q96SF2 557 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 RTN4RQ9BZR6 473 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 OPN3Q9H1Y3 402 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 RNF122Q9H9V4 155 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 FAM120CQ9NX05 1096 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 ELOVL5Q9NYP7 299 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 FLRT3Q9NZU0 649 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 NTMQ9P121 344 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 DKKL1Q9UK85 242 aa9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 ANK3Q12955 4377 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-230ENST00000557201 A0A1W2PRB8 838 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 KIAA1324LA8MWY0 1029 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 TNFRSF21O75509 655 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 SMNDC1O75940 238 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■□□□□ 10.8
HNRNPC-230ENST00000557201 PSMG1O95456 288 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 FAM107AO95990 144 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 CD8BP10966 210 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 TCEA1P23193 301 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 IL12BP29460 328 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 POLR2JP52435 117 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 OR4F3Q6IEY1 312 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 MSANTD1Q6ZTZ1 278 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ZNF551Q7Z340 670 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 MTERF4Q7Z6M4 381 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 P3H2Q8IVL5 708 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 FUNDC1Q8IVP5 155 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 SLC44A2Q8IWA5 706 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 OR2L13Q8N349 312 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 OR9I1Q8NGQ6 314 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 TSPEARQ8WU66 669 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 EFHD2Q96C19 240 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ELP4Q96EB1 424 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 PIK3IP1Q96FE7 263 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 OR52E6Q96RD3 313 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 MDFIQ99750 246 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 PIGQQ9BRB3 760 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 FAM107BQ9H098 131 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 DSN1Q9H410 356 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 SLC52A3Q9NQ40 469 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 SAR1AQ9NR31 198 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ZNF226Q9NYT6 803 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms