RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ADAMTS15Q8TE58 950 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 ADAMTS18Q8TE60 1221 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 PHF10Q8WUB8 498 aaKnown RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 PATE1Q8WXA2 126 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 HDAC2Q92769 488 aaKnown RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 RAB8BQ92930 207 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 UCN3Q969E3 161 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 FKBP10Q96AY3 582 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 RBM18Q96H35 190 aaKnown RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 TMEM19Q96HH6 336 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 BOD1Q96IK1 185 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 MAGED4Q96JG8 741 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SLC35G5Q96KT7 338 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 ZNF354BQ96LW1 612 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 MBOAT4Q96T53 435 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 CD180Q99467 661 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 TUBA1CQ9BQE3 449 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 AMBRA1Q9C0C7 1298 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 OR51I1Q9H343 314 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 CXorf56Q9H5V9 222 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 ARMC7Q9H6L4 198 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 IL21RQ9HBE5 538 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 VCX3AQ9NNX9 186 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 KRT84Q9NSB2 600 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 ACER3Q9NUN7 267 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 GIN1Q9NXP7 522 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 KLHL28Q9NXS3 571 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SCN3BQ9NY72 215 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 C5AR2Q9P296 337 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 KIF17Q9P2E2 1029 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SEC14L3Q9UDX4 400 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SLC23A1Q9UHI7 598 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SLC13A4Q9UKG4 626 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 ABCG2Q9UNQ0 655 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 C19orf53Q9UNZ5 99 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 MRPS33Q9Y291 106 aaKnown RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 SLC9A8Q9Y2E8 581 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 IFT52Q9Y366 437 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 NAALAD2Q9Y3Q0 740 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 MAGED1Q9Y5V3 778 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 PTPRSQ13332 1948 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 CACNA1HO95180 2353 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 GVINP1Q7Z2Y8 2422 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 HYKKA2RU49 373 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ARRDC5A6NEK1 342 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 TRIM64CA6NLI5 447 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 TTC36A6NLP5 189 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 C4orf51C9J302 202 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 K7ESF4 209 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SYT5O00445 386 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 BCKDKO14874 412 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CASC3O15234 703 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 P2RX6O15547 441 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CHST10O43529 356 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 NUDT21O43809 227 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 PLOD3O60568 738 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PRAMEF10O60809 474 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 B4GALT2O60909 372 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PROP1O75360 226 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CCNB2O95067 398 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 GADD45GO95257 159 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZBTB11O95625 1053 aaPredicted RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 OXSR1O95747 527 aaPredicted RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 LGI1O95970 557 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ATP1B1P05026 303 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 BCHEP06276 602 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 FESP07332 822 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 GUSBP08236 651 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ALOX5P09917 674 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CCDC159P0C7I6 412 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SMIM18P0DKX4 95 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 C8orf89P0DMQ9 161 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 RNH1P13489 461 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 PVRP15151 417 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ATP6V1B1P15313 513 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ST6GAL1P15907 406 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 EEF1B2P24534 225 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 ALDH4A1P30038 563 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 IFNGR2P38484 337 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CAPZBP47756 277 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 OR1E2P47887 323 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ALDH3B2P48448 385 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PPM1FP49593 454 aaPredicted RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 HLCSP50747 726 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CDH12P55289 794 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 MAZP56270 477 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 RAB38P57729 211 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CXCR4P61073 352 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ISL1P61371 349 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 RPP38P78345 283 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 COX10Q12887 443 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 NPRL3Q12980 569 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 APOFQ13790 326 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 FAM53BQ14153 422 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 MAPK11Q15759 364 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SYPL1Q16563 259 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 DUSP7Q16829 419 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZSWIM7Q19AV6 140 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PRTGQ2VWP7 1150 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms