RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 AGBL2Q5U5Z8 902 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 SFRP4Q6FHJ7 346 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-238ENST00000556288 H3F3CQ6NXT2 135 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 SLC48A1Q6P1K1 146 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 OPN5Q6U736 354 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 IGFL3Q6UXB1 125 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 GFRALQ6UXV0 394 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 Q6ZS92 163 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 FAM47EQ6ZV65 393 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 GALNTL5Q7Z4T8 443 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 TICAM1Q8IUC6 712 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 TAGAPQ8N103 731 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 CYP4Z2PQ8N1L4 340 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 LRRC25Q8N386 305 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF781Q8N8C0 355 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 FNDC5Q8NAU1 212 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 TMEM178AQ8NBL3 297 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 OR2T11Q8NH01 316 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 SLC22A8Q8TCC7 542 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 LRRC8CQ8TDW0 803 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF721Q8TF20 911 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 SLC9A6Q92581 669 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF75CPQ92670 426 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-238ENST00000556288 PPCDCQ96CD2 204 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 THOC1Q96FV9 657 aaKnown RBP4.28□□□□□ -1.72
ATXN3-238ENST00000556288 EGLN2Q96KS0 407 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 ATP6V1G3Q96LB4 118 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 PPP3R2Q96LZ3 170 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 C3orf30Q96M34 536 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 PRPF18Q99633 342 aaKnown RBP4.28□□□□□ -1.72
ATXN3-238ENST00000556288 NPAS2Q99743 824 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 PTDSS2Q9BVG9 487 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF717Q9BY31 904 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-238ENST00000556288 NUF2Q9BZD4 464 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 TUBB1Q9H4B7 451 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 CXorf21Q9HAI6 301 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 EQTNQ9NQ60 294 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 SLC35C2Q9NQQ7 365 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 ALKBH4Q9NXW9 302 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 MARCOQ9UEW3 520 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-238ENST00000556288 NPIPA1Q9UND3 350 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 OSGIN2Q9Y236 505 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 RAP2CQ9Y3L5 183 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 OR10H1Q9Y4A9 318 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 PCDHGB6Q9Y5F9 930 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 DNAJC15Q9Y5T4 150 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 SNX8Q9Y5X2 465 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 CFAP47Q6ZTR5 3102 aa4.28□□□□□ -1.72
ATXN3-238ENST00000556288 HCFC1P51610 2035 aa4.28□□□□□ -1.73
ATXN3-238ENST00000556288 DOCK7Q96N67 2140 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 TLN1Q9Y490 2541 aaKnown RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 DOPEY2Q9Y3R5 2298 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 A0A087WWL8 130 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 SYNDIG1LA6NDD5 238 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 ANKUB1A6NFN9 424 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 FAM166BA8MTA8 275 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 TCP11X1B4DZS4 312 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 TP53I11O14683 189 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 TFECO14948 347 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 MPPED1O15442 326 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 ATP8B1O43520 1251 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 GMFGO60234 142 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 DIAPH2O60879 1101 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 SLC25A12O75746 678 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 TRAPPC6AO75865 159 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 RSL1D1O76021 490 aaKnown RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 SCELO95171 688 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 BCKDHAP12694 445 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 CNR1P21554 472 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 TCEA1P23193 301 aaKnown RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 KRT20P35900 424 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 SERPINB5P36952 375 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 HPCAL1P37235 193 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 ASMTP46597 345 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 LOXL3P58215 753 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 KCNJ2P63252 427 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 DMTNQ08495 405 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 BST1Q10588 318 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 MAD2L1Q13257 205 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 UGT3A2Q3SY77 523 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 HSP90B2PQ58FF3 399 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 PIGGQ5H8A4 983 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 C6orf136Q5SQH8 315 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 CPTPQ5TA50 214 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 FHL5Q5TD97 284 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 PRAMEF20Q5VT98 475 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 CES4AQ5XG92 561 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 SLC22A10Q63ZE4 541 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 IGFL2Q6UWQ7 119 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 TMEM107Q6UX40 140 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 RTL4Q6ZR62 310 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 Q6ZSR9 355 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 ZNF551Q7Z340 670 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 MDGA2Q7Z553 956 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 R3HCC1LQ7Z5L2 792 aaKnown RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 WDR53Q7Z5U6 358 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 SLC44A2Q8IWA5 706 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 FAM9CQ8IZT9 166 aa4.27□□□□□ -1.73
ATXN3-238ENST00000556288 CPSF7Q8N684 471 aaKnown RBP4.27□□□□□ -1.73
ATXN3-238ENST00000556288 BCORP1Q8N888 145 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms