RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.64■□□□□ 0.41
PRKCH-219ENST00000555906 HEXAP06865 529 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 THBDP07204 575 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 TUBBP07437 444 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 LINGO3P0C6S8 592 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 AGTR1P30556 359 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 SERPINB5P36952 375 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 EIF1P41567 113 aaKnown RBP17.64■□□□□ 0.41
PRKCH-219ENST00000555906 SUMO3P55854 103 aaPredicted RBP17.64■□□□□ 0.41
PRKCH-219ENST00000555906 ZNF117Q03924 483 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 FOXF1Q12946 379 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 ANKRD34AQ69YU3 496 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 CLEC9AQ6UXN8 241 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 BEND4Q6ZU67 534 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 STK32CQ86UX6 486 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 ZNF527Q8NB42 609 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 OR7A2PQ8NGA2 310 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 OR56A1Q8NGH5 318 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 KLHDC3Q9BQ90 382 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 MECRQ9BV79 373 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 ATAD3AQ9NVI7 634 aa17.64■□□□□ 0.41
PRKCH-219ENST00000555906 ZANQ9Y493 2812 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 A0A0J9YW62 118 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 LYPLA1O75608 230 aaPredicted RBP17.63■□□□□ 0.41
PRKCH-219ENST00000555906 KRT16P08779 473 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 NUDT17P0C025 328 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 NID1P14543 1247 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 ATP6V1C1P21283 382 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 NR1H2P55055 460 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 PTGR1Q14914 329 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 ZNF239Q16600 458 aaKnown RBP17.63■□□□□ 0.41
PRKCH-219ENST00000555906 NATD1Q8N6N6 113 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 PPP1R14CQ8TAE6 165 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 SFXN5Q8TD22 340 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 RNF128Q8TEB7 428 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 OR5P2Q8WZ92 322 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 CHMP6Q96FZ7 201 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 ACTRT3Q9BYD9 372 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 SLC17A7Q9P2U7 560 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 GIMAP2Q9UG22 337 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 SNX8Q9Y5X2 465 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 PRR14LQ5THK1 2151 aa17.63■□□□□ 0.41
PRKCH-219ENST00000555906 SOX30O94993 753 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 OPN1LWP04000 364 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 LAMP1P11279 417 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 PSMB1P20618 241 aaKnown RBP17.62■□□□□ 0.41
PRKCH-219ENST00000555906 ADH6P28332 368 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 ATP6AP1LQ52LC2 224 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 DCST2Q5T1A1 773 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 GTF2IRD2BQ6EKJ0 949 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 YTHDF3Q7Z739 585 aaKnown RBP17.62■□□□□ 0.41
PRKCH-219ENST00000555906 GTF2IRD2Q86UP8 949 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 LILRA2Q8N149 483 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 OR2W6PQ8NHA6 318 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 PHOSPHO1Q8TCT1 267 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 AGR3Q8TD06 166 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 IGFBPL1Q8WX77 278 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 CPNE4Q96A23 557 aaPredicted RBP17.62■□□□□ 0.41
PRKCH-219ENST00000555906 PERPQ96FX8 193 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 Q96MF0 132 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 GSX2Q9BZM3 304 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 ACTR6Q9GZN1 396 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 HOXD1Q9GZZ0 328 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 CXorf36Q9H7Y0 433 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 L2HGDHQ9H9P8 463 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 GPATCH2Q9NW75 528 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 LGALS13Q9UHV8 139 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 ACTL7BQ9Y614 415 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 FREM1Q5H8C1 2179 aa17.62■□□□□ 0.41
PRKCH-219ENST00000555906 TLDC2A0PJX2 215 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 GJE1A6NN92 205 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 H3BNH8 94 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 KLF4O43474 513 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 PEX11AO75192 247 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 PABPC4LP0CB38 370 aaKnown RBP17.61■□□□□ 0.41
PRKCH-219ENST00000555906 CCT3P49368 545 aaKnown RBP17.61■□□□□ 0.41
PRKCH-219ENST00000555906 TP53BP2Q13625 1128 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 RNPS1Q15287 305 aaKnown RBP17.61■□□□□ 0.41
PRKCH-219ENST00000555906 KLHL26Q53HC5 615 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 ZNF704Q6ZNC4 412 aaPredicted RBP17.61■□□□□ 0.41
PRKCH-219ENST00000555906 ZCCHC23Q6ZST2 131 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 Q71RC1 249 aaPredicted RBP17.61■□□□□ 0.41
PRKCH-219ENST00000555906 MOAP1Q96BY2 351 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 ARSGQ96EG1 525 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 C1orf50Q9BV19 199 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 ICAM5Q9UMF0 924 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 FAF1Q9UNN5 650 aaPredicted RBP17.61■□□□□ 0.41
PRKCH-219ENST00000555906 GPR52Q9Y2T5 361 aa17.61■□□□□ 0.41
PRKCH-219ENST00000555906 GPC6Q9Y625 555 aaPredicted RBP17.61■□□□□ 0.41
PRKCH-219ENST00000555906 H7C1Q1 480 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 TMCC2O75069 709 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 SHC1P29353 583 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 ARRB2P32121 409 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 SFTPDP35247 375 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 PTH2RP49190 550 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 P2RX1P51575 399 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 CARD18P57730 90 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 LSM12Q3MHD2 195 aaKnown RBP17.6■□□□□ 0.41
PRKCH-219ENST00000555906 SPDYE7PQ495Y7 208 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 C6orf136Q5SQH8 315 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms