RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 CD97P48960 835 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 SUMO3P55854 103 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-221ENST00000555773 CD226Q15762 336 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 MRPL2Q5T653 305 aaKnown RBP11.38□□□□□ -0.59
SHMT2-221ENST00000555773 C1orf146Q5VVC0 180 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 CYP2R1Q6VVX0 501 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF836Q6ZNA1 936 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 FKBP9P1Q75LS8 142 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF550Q7Z398 422 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 HMGN2P46Q86SG4 172 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 C10orf67Q8IYJ2 551 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 EXD3Q8N9H8 876 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 WDSUB1Q8N9V3 476 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 FAM71CQ8NEG0 241 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 GPR32P1Q8NGA4 272 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 OR1J4Q8NGS1 313 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 B4GALNT2Q8NHY0 566 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 PYURFQ96I23 114 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-221ENST00000555773 RTN4RQ9BZR6 473 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 SLC25A18Q9H1K4 315 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 PTGES2Q9H7Z7 377 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 ZFP64Q9NPA5 681 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF71Q9NQZ8 489 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-221ENST00000555773 KLHL1Q9NR64 748 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 DEPPQ9NTK1 212 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 RLIMQ9NVW2 624 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 PPP4R1LQ9P1A2 415 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 SLC9A8Q9Y2E8 581 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 CHST2Q9Y4C5 530 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 CSAG2Q9Y5P2 127 aa11.38□□□□□ -0.59
SHMT2-221ENST00000555773 DSPP15924 2871 aaKnown RBP11.38□□□□□ -0.59
SHMT2-221ENST00000555773 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 CLDN24A6NM45 220 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 ZZEF1O43149 2961 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 PRKD3O94806 890 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 UBTFL6P0CB48 400 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-221ENST00000555773 ATP6V1B2P21281 511 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 DNASE1L1P49184 302 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 P2RX1P51575 399 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 KCNC4Q03721 635 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 FOXO1Q12778 655 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 SKP2Q13309 424 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 INAQ16352 499 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 HYAL4Q2M3T9 481 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF771Q7L3S4 317 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-221ENST00000555773 FADS6Q8N9I5 356 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 GATSQ8NAP1 163 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 ZFP62Q8NB50 900 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-221ENST00000555773 OR4K17Q8NGC6 315 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 OR5W2Q8NH69 310 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 CNOT9Q92600 299 aaKnown RBP11.37□□□□□ -0.59
SHMT2-221ENST00000555773 PNPLA2Q96AD5 504 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 ARSGQ96EG1 525 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 TPD52L3Q96J77 140 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF597Q96LX8 424 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 ARHGDIGQ99819 225 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 UGT2B28Q9BY64 529 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 HES7Q9BYE0 225 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 DNAJB12Q9NXW2 375 aaKnown RBP11.37□□□□□ -0.59
SHMT2-221ENST00000555773 ICAM5Q9UMF0 924 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 CARD8Q9Y2G2 431 aa11.37□□□□□ -0.59
SHMT2-221ENST00000555773 TCRBV5S2A0A599 114 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 G3V3Y1 287 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 FAAHO00519 579 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 GNB5O14775 395 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 FMO6PO60774 539 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 CYP7B1O75881 506 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 RASAL1O95294 804 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 EPPINO95925 133 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 LINGO3P0C6S8 592 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 UQCRBP14927 111 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 PGCP20142 388 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 MEOX1P50221 254 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 GPR85P60893 370 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF117Q03924 483 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 CBFBQ13951 182 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 NRF1Q16656 503 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 PLEKHN1Q494U1 663 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-221ENST00000555773 GLIPR1L2Q4G1C9 344 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 IFI44LQ53G44 452 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 OR5M10Q6IEU7 315 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 CBLN3Q6UW01 205 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-221ENST00000555773 TEX19Q8NA77 164 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 OR2M3Q8NG83 312 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 GEMIN6Q8WXD5 167 aaKnown RBP11.36□□□□□ -0.59
SHMT2-221ENST00000555773 HSH2DQ96JZ2 352 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-221ENST00000555773 GNRHR2Q96P88 292 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 DSN1Q9H410 356 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 QPCTLQ9NXS2 382 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 TUBA8Q9NY65 449 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-221ENST00000555773 MED11Q9P086 117 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 B4GALT7Q9UBV7 327 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 SH3GLB1Q9Y371 365 aa11.36□□□□□ -0.59
SHMT2-221ENST00000555773 MRPS18CQ9Y3D5 142 aaKnown RBP11.36□□□□□ -0.59
SHMT2-221ENST00000555773 EPG5Q9HCE0 2579 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 CACNA1BQ00975 2339 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms