RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 FAM170AA1A519 330 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 GJE1A6NN92 205 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 E9PMD0 336 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 SGK494L7N484 410 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 VEGFDO43915 354 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 STX11O75558 287 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 NDUFA7O95182 113 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 PNPP00491 289 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 RALAP11233 206 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 ATP5A1P25705 553 aaKnown RBP2.21□□□□□ -2.06
SCFD1-216ENST00000555550 HSPA1LP34931 641 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 SUCLG1P53597 346 aaKnown RBP2.21□□□□□ -2.06
SCFD1-216ENST00000555550 BDH1Q02338 343 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 MAP2K1Q02750 393 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-216ENST00000555550 SLC10A7Q0GE19 358 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 ST3GAL3Q11203 375 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 SNX1Q13596 522 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 PVRIGQ6DKI7 326 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 ZFP2Q6ZN57 461 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 ARCQ7LC44 396 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 TAF8Q7Z7C8 310 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 LINC01551Q86U37 167 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 ZNF429Q86V71 674 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 MDS2Q8NDY4 140 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 OR1E3Q8WZA6 343 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 PIGCQ92535 297 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 MS4A14Q96JA4 679 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 ARHGDIGQ99819 225 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 TMEM121Q9BTD3 319 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 SLC17A9Q9BYT1 436 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 POLR3FQ9H1D9 316 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-216ENST00000555550 UTP6Q9NYH9 597 aaKnown RBP2.21□□□□□ -2.06
SCFD1-216ENST00000555550 RIMS3Q9UJD0 308 aa2.21□□□□□ -2.06
SCFD1-216ENST00000555550 STRAPQ9Y3F4 350 aaKnown RBP2.21□□□□□ -2.06
SCFD1-216ENST00000555550 TTC21BQ7Z4L5 1316 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 IGLV4-60A0A075B6I1 120 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 PSMB11A5LHX3 300 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 ARHGAP42A6NI28 874 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 WASHC1A8K0Z3 465 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 ADAM12O43184 909 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 CSF2P04141 144 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 SERPINA2P20848 420 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 PRDX6P30041 224 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 CSNK1G2P78368 415 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 EIF4EBP1Q13541 118 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-216ENST00000555550 WDR74Q6RFH5 385 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-216ENST00000555550 TMEM26Q6ZUK4 368 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 CYS1Q717R9 158 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 LPCAT2Q7L5N7 544 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 NRMQ8IXM6 262 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 CERS5Q8N5B7 392 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 SPC24Q8NBT2 197 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 STKLD1Q8NE28 680 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 URGCPQ8TCY9 931 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 FAM151AQ8WW52 585 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 UCN3Q969E3 161 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 UPRTQ96BW1 309 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 PLA2G2FQ9BZM2 168 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 MAGT1Q9H0U3 335 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 PPDPFQ9H3Y8 114 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 TMEM231Q9H6L2 316 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 GPN2Q9H9Y4 310 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-216ENST00000555550 P2RX2Q9UBL9 471 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 KCNN3Q9UGI6 736 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 XPO7Q9UIA9 1087 aaKnown RBP2.2□□□□□ -2.06
SCFD1-216ENST00000555550 DNPEPQ9ULA0 475 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 PLA2G4CQ9UP65 541 aa2.2□□□□□ -2.06
SCFD1-216ENST00000555550 IGLV4-69A0A075B6H9 119 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 LOC100131303A0A0U1RQF7 123 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 LGALS8O00214 317 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 FCN1O00602 326 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 MED6O75586 246 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 SNAPINO95295 136 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 SLC4A1P02730 911 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 CXCL10P02778 98 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 ANXA3P12429 323 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 RCC1P18754 421 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-216ENST00000555550 PRDX3P30048 256 aaKnown RBP2.19□□□□□ -2.06
SCFD1-216ENST00000555550 AXLP30530 894 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 AKT2P31751 481 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 PRPS1P60891 318 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 ACTN3Q08043 901 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-216ENST00000555550 RGS1Q08116 209 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 GGTLC2Q14390 218 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 RABGAP1LQ5R372 815 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 TSPO2Q5TGU0 170 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 ATF7IP2Q5U623 682 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 ARSKQ6UWY0 536 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 WDR88Q6ZMY6 472 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 C1orf186Q6ZWK4 172 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 VRK2Q86Y07 508 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 MTURNQ8N3F0 131 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 CABS1Q96KC9 395 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 SLC25A51Q9H1U9 297 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 NTN4Q9HB63 628 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 POLD4Q9HCU8 107 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 NECAP2Q9NVZ3 263 aa2.19□□□□□ -2.06
SCFD1-216ENST00000555550 GAKO14976 1311 aa2.18□□□□□ -2.06
SCFD1-216ENST00000555550 NKX2-6A6NCS4 301 aa2.18□□□□□ -2.06
SCFD1-216ENST00000555550 OR6C65A6NJZ3 312 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms