RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CXCR6O00574 342 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 GSC2O15499 205 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 HPNP05981 417 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 UBL4AP11441 157 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 ZNF24P17028 368 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 GGT1P19440 569 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 AQP1P29972 269 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 KCNJ5P48544 419 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 SUMO3P55854 103 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-219ENST00000555323 DSCR4P56555 118 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-219ENST00000555323 PMP22Q01453 160 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 PLGLB1Q02325 96 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 ZNF117Q03924 483 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 DMTNQ08495 405 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 SKP2Q13309 424 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 SLC10A1Q14973 349 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 DUSP7Q16829 419 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 GLYR1Q49A26 553 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-219ENST00000555323 MRPL2Q5T653 305 aaKnown RBP11.54□□□□□ -0.56
SYNE2-219ENST00000555323 GLYATQ6IB77 296 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 FAM180AQ6UWF9 173 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 ZNF836Q6ZNA1 936 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 HMGN2P46Q86SG4 172 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 ARMC8Q8IUR7 673 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 CLIP4Q8N3C7 705 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 RNF148Q8N7C7 305 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 ZNF614Q8N883 585 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 GATSQ8NAP1 163 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 OR52E4Q8NGH9 312 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 B4GALNT2Q8NHY0 566 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 RASSF5Q8WWW0 418 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 TAMM41Q96BW9 452 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 DTNBP1Q96EV8 351 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 JSRP1Q96MG2 331 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-219ENST00000555323 PINK1Q9BXM7 581 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 MMADHCQ9H3L0 296 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-219ENST00000555323 DSN1Q9H410 356 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 PTGES2Q9H7Z7 377 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 EVA1AQ9H8M9 152 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 PLSCR2Q9NRY7 297 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 RLIMQ9NVW2 624 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 B4GALT7Q9UBV7 327 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 SEC14L3Q9UDX4 400 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 FBXL2Q9UKC9 423 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 PACSIN3Q9UKS6 424 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 CARD8Q9Y2G2 431 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 NTNG1Q9Y2I2 539 aa11.54□□□□□ -0.56
SYNE2-219ENST00000555323 NBEAQ8NFP9 2946 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 TTLL8A6PVC2 850 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 B8ZZF3 427 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 ETV2O00321 342 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 SYT5O00445 386 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 FAAHO00519 579 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 OIP5O43482 229 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 HCRTR2O43614 444 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 ZIC3O60481 467 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 TPST1O60507 370 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 BCAS1O75363 584 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 DNAJC8O75937 253 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 EPPINO95925 133 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 LGI1O95970 557 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 IFNA14P01570 189 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 IGHG3P01860 377 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 SRD5A2P31213 254 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 RFC3P40938 356 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 DLX5P56178 289 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 SELENOWP63302 87 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 ALDH6A1Q02252 535 aaKnown RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 BNIP2Q12982 314 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 TRIM25Q14258 630 aaKnown RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 GANABQ14697 944 aaKnown RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 CMPK2Q5EBM0 449 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 CCDC121Q6ZUS5 278 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 ZNF440Q8IYI8 595 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 ZNF843Q8N446 348 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 FAM156AQ8NDB6 213 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 OR4K17Q8NGC6 315 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 OR5W2Q8NH69 310 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 GPR119Q8TDV5 335 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 NR4A3Q92570 626 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 CNOT9Q92600 299 aaKnown RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 C1GALT1C1Q96EU7 318 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 SLX1AQ9BQ83 275 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 THTPAQ9BU02 230 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 OR2B2Q9GZK3 357 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 CACYBPQ9HB71 228 aaKnown RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 AGPAT4Q9NRZ5 378 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 ASF1BQ9NVP2 202 aa11.53□□□□□ -0.56
SYNE2-219ENST00000555323 DNAJB12Q9NXW2 375 aaKnown RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 TLN1Q9Y490 2541 aaKnown RBP11.53□□□□□ -0.56
SYNE2-219ENST00000555323 ATRXP46100 2492 aa11.52□□□□□ -0.56
SYNE2-219ENST00000555323 A0A087WZY1 265 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 A0A1B0GVC2 190 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 ANKUB1A6NFN9 424 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 SUSD5O60279 629 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 ADAM11O75078 769 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 LINGO3P0C6S8 592 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 UBTFL6P0CB48 400 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-219ENST00000555323 CD247P20963 164 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms