RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 SSX8Q7RTT4 187 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
NEDD1-207ENST00000555114 TDRPQ86YL5 185 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 HOMEZQ8IX15 550 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 GABRG1Q8N1C3 465 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 SLC43A2Q8N370 569 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 C17orf53Q8N3J3 647 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-207ENST00000555114 BANPQ8N9N5 519 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 MAPK1IP1LQ8NDC0 245 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 FBXO30Q8TB52 745 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 FAM110BQ8TC76 370 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 ABHD3Q8WU67 409 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 CIDECQ96AQ7 238 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-207ENST00000555114 CHMP6Q96FZ7 201 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 EGLN2Q96KS0 407 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 CCT7Q99832 543 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 REEP4Q9H6H4 257 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 ACSS1Q9NUB1 689 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-207ENST00000555114 C1orf109Q9NX04 203 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 NTMQ9P121 344 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 LIPT1Q9Y234 373 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 CHD3Q12873 2000 aaKnown RBP13.79□□□□□ -0.2
NEDD1-207ENST00000555114 PCNX3Q9H6A9 2034 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 RNF212BA8MTL3 300 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 CD5LO43866 347 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 TBX19O60806 448 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 GCM2O75603 506 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-207ENST00000555114 YES1P07947 543 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 SOD3P08294 240 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 DANCRP0C864 163 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 ACP2P11117 423 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 NEFHP12036 1026 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 GCAP28676 217 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 CDKN1AP38936 164 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 SUMO3P55854 103 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-207ENST00000555114 POU6F2P78424 691 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-207ENST00000555114 KRTAP1-1Q07627 177 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 FOXF1Q12946 379 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 ITGADQ13349 1161 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 TAB1Q15750 504 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 DUSP5Q16690 384 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 CCDC153Q494R4 210 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 ANKRD26P1Q6NSI1 321 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 TUSC5Q8IXB3 177 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 SLC16A11Q8NCK7 471 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 POC1BQ8TC44 478 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 PHOSPHO1Q8TCT1 267 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 ARL8AQ96BM9 186 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 GIMAP5Q96F15 307 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 NPAS1Q99742 590 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 BTBD2Q9BX70 525 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 HOXD1Q9GZZ0 328 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 SLCO5A1Q9H2Y9 848 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 YAE1D1Q9NRH1 226 aa13.78□□□□□ -0.2
NEDD1-207ENST00000555114 MAGED1Q9Y5V3 778 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-207ENST00000555114 GPC6Q9Y625 555 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-207ENST00000555114 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
NEDD1-207ENST00000555114 COL6A5A8TX70 2615 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 NPIPB8E9PQR5 432 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 G3V2L1 256 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 RIPK2O43353 540 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 AKAP10O43572 662 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 CHEK2O96017 543 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 ADAP00813 363 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 LINGO3P0C6S8 592 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 ASMTP46597 345 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 DNAJB13P59910 316 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 FAPQ12884 760 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 KIAA0040Q15053 153 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.21
NEDD1-207ENST00000555114 R3HCC1LQ7Z5L2 792 aaKnown RBP13.77□□□□□ -0.21
NEDD1-207ENST00000555114 ZNF619Q8N2I2 560 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
NEDD1-207ENST00000555114 LILRB1Q8NHL6 650 aaPredicted RBP13.77□□□□□ -0.21
NEDD1-207ENST00000555114 STACQ99469 402 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 DUSP22Q9NRW4 184 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 KLHL9Q9P2J3 617 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 TMED5Q9Y3A6 229 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 ZANQ9Y493 2812 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 ATRQ13535 2644 aa13.77□□□□□ -0.21
NEDD1-207ENST00000555114 ZNF195O14628 629 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 KRT16P08779 473 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 SLC7A1P30825 629 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 ACVR1BP36896 505 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 RPL3P39023 403 aaKnown RBP13.76□□□□□ -0.21
NEDD1-207ENST00000555114 FRKP42685 505 aaPredicted RBP13.76□□□□□ -0.21
NEDD1-207ENST00000555114 CCT5P48643 541 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 P2RX1P51575 399 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 BSPH1Q075Z2 132 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 SELENBP1Q13228 472 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 TSC22D1Q15714 1073 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 CD226Q15762 336 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 NRF1Q16656 503 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 TMEM176BQ3YBM2 270 aaPredicted RBP13.76□□□□□ -0.21
NEDD1-207ENST00000555114 CCNJQ5T5M9 372 aa13.76□□□□□ -0.21
NEDD1-207ENST00000555114 BHLHA15Q7RTS1 189 aaPredicted RBP13.76□□□□□ -0.21
NEDD1-207ENST00000555114 NUFIP2Q7Z417 695 aaKnown RBP13.76□□□□□ -0.21
NEDD1-207ENST00000555114 ZAR1Q86SH2 424 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms