RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SPACA3Q8IXA5 215 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 KDF1Q8NAX2 398 aaPredicted RBP16.09■□□□□ 0.17
SHOX-204ENST00000554971 OR8J1Q8NGP2 316 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 OR51Q1Q8NH59 317 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 GLIPR2Q9H4G4 154 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 TEX10Q9NXF1 929 aaPredicted RBP16.09■□□□□ 0.17
SHOX-204ENST00000554971 DAPK2Q9UIK4 370 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 RPL36Q9Y3U8 105 aaKnown RBP16.09■□□□□ 0.17
SHOX-204ENST00000554971 CNTRLQ7Z7A1 2325 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 A0A0G2JPF8 293 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 TRBV4-1A0A0J9YWV2 114 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 OR2W5A6NFC9 320 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 METTL15A6NJ78 407 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 HNRNPCL2B2RXH8 293 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 HNRNPCL3B7ZW38 293 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 CHST10O43529 356 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 B4GALT2O60909 372 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 HNRNPCL4P0DMR1 293 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 NR2F1P10589 423 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 PORP16435 677 aaPredicted RBP16.09■□□□□ 0.17
SHOX-204ENST00000554971 GADD45AP24522 165 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 GPC1P35052 558 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 ZNF45Q02386 682 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 TGM3Q08188 693 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 TP53BP2Q13625 1128 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 OCLNQ16625 522 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 CYP27C1Q4G0S4 372 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 C12orf73Q69YU5 71 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 SHISA6Q6ZSJ9 500 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 CA13Q8N1Q1 262 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 OR56A1Q8NGH5 318 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 STT3BQ8TCJ2 826 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 RPL3LQ92901 407 aaKnown RBP16.09■□□□□ 0.17
SHOX-204ENST00000554971 MESP1Q9BRJ9 268 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 OR51I1Q9H343 314 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 KCMF1Q9P0J7 381 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 IFT52Q9Y366 437 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 KMT2BQ9UMN6 2715 aaPredicted RBP16.09■□□□□ 0.17
SHOX-204ENST00000554971 TLN1Q9Y490 2541 aaKnown RBP16.09■□□□□ 0.17
SHOX-204ENST00000554971 IGSF10Q6WRI0 2623 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 ATRXP46100 2492 aa16.08■□□□□ 0.17
SHOX-204ENST00000554971 DOCK10Q96BY6 2186 aa16.08■□□□□ 0.17
SHOX-204ENST00000554971 C21orf140B9A014 251 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 RAB40ALP0C0E4 278 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 POU2F1P14859 743 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 GSSP48637 474 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 RPS26P62854 115 aaKnown RBP16.08■□□□□ 0.16
SHOX-204ENST00000554971 ERV3-1Q14264 604 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 RPS26P11Q5JNZ5 115 aaPredicted RBP16.08■□□□□ 0.16
SHOX-204ENST00000554971 CASP12Q6UXS9 341 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 ZBTB46Q86UZ6 589 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 RAB8BQ92930 207 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 PEX11GQ96HA9 241 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 BBS4Q96RK4 519 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 SERINC2Q96SA4 455 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 RBCK1Q9BYM8 510 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 DPH1Q9BZG8 443 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 TGIF2Q9GZN2 237 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 POLR2J3Q9H1A7 115 aaKnown RBP16.08■□□□□ 0.16
SHOX-204ENST00000554971 AMBNQ9NP70 447 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 WDR70Q9NW82 654 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 TCFL5Q9UL49 500 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 DAPP1Q9UN19 280 aa16.08■□□□□ 0.16
SHOX-204ENST00000554971 C9J4A7 227 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 ASNA1O43681 348 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 OR10H3O60404 316 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 UGT2B17O75795 530 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 UMODP07911 640 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 ZGLP1P0C6A0 271 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 GSTM3P21266 225 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 ITPKBP27987 946 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 TLE3Q04726 772 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 TMEM52Q8NDY8 209 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 SUN3Q8TAQ9 357 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 SNRNP27Q8WVK2 155 aaKnown RBP16.07■□□□□ 0.16
SHOX-204ENST00000554971 WDR54Q9H977 334 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 LANCL2Q9NS86 450 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 ZCCHC3Q9NUD5 404 aaKnown RBP16.07■□□□□ 0.16
SHOX-204ENST00000554971 CALML5Q9NZT1 146 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 SELENONQ9NZV5 590 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 FARSAQ9Y285 508 aaKnown RBP16.07■□□□□ 0.16
SHOX-204ENST00000554971 ASB4Q9Y574 426 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 PEX16Q9Y5Y5 336 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 FAM227AF5H4B4 570 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 CCRL2O00421 344 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 SYT5O00445 386 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 B3GALT2O43825 422 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 PTHP01270 115 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 FHP07954 510 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 OR12D1P0DN82 309 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 XKP51811 444 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 NCBP2P52298 156 aaKnown RBP eCLIP16.07■□□□□ 0.16
SHOX-204ENST00000554971 NUDT6P53370 316 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 PRKCDQ05655 676 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 IL10RAQ13651 578 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 ZNF181Q2M3W8 571 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 TMEM236Q5W0B7 351 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 PGBD2Q6P3X8 592 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 PRSS58Q8IYP2 241 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms