RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ABLIM3O94929 683 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 SPDEFO95238 335 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 OR12D1P0DN82 309 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 SPINT3P49223 89 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ECH1Q13011 328 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 SEC23BQ15437 767 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 CCSMST1Q4G0I0 132 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 GRHL2Q6ISB3 625 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 NPAS4Q8IUM7 802 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 HS6ST3Q8IZP7 471 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ARMC10Q8N2F6 343 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 TBC1D19Q8N5T2 526 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 MED8Q96G25 268 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 TOX2Q96NM4 488 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 PKP4Q99569 1192 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 LRRN3Q9H3W5 708 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ZFP57Q9NU63 452 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 GNG14A0A1W2PPG7 69 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FAAHO00519 579 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 IGF2P01344 180 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 SLC1A3P43003 542 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 E2F1Q01094 437 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 CAP1Q01518 475 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 ACSM1Q08AH1 577 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF155Q12901 538 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 MINDY4Q4G0A6 757 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 EOGTQ5NDL2 527 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 DCST1Q5T197 706 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FAM69AQ5T7M9 428 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 ELP2Q6IA86 826 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 BEND4Q6ZU67 534 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 SKA3Q8IX90 412 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 OR6V1Q8N148 313 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 HDDC3Q8N4P3 179 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF565Q8N9K5 539 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 TRMT10AQ8TBZ6 339 aaKnown RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FGF11Q92914 225 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 CLP1Q92989 425 aaKnown RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 BBS4Q96RK4 519 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FUZQ9BT04 418 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 OR10A4Q9H209 315 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 BRD9Q9H8M2 597 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 TMEM202A6NGA9 273 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 RNASET2O00584 256 aaKnown RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 SC5DO75845 299 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 RGS9O75916 674 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 CXCL14O95715 111 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 PSMB1P20618 241 aaKnown RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 MAPK3P27361 379 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 MTNR1AP48039 350 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 DGKGP49619 791 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 PGDP52209 483 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 SNRPD1P62314 119 aaKnown RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 MELKQ14680 651 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 AGTRAPQ6RW13 159 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 GLDNQ6ZMI3 551 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 LHFPL3Q86UP9 236 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FBXO15Q8NCQ5 510 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 OR51Q1Q8NH59 317 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 PHOSPHO1Q8TCT1 267 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 SCAMP4Q969E2 229 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 ZDHHC12Q96GR4 267 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 ZFP3Q96NJ6 502 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 GAL3ST1Q99999 423 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 BRF2Q9HAW0 419 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 RASL12Q9NYN1 266 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 AKAP7Q9P0M2 348 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 PTGFRNQ9P2B2 879 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 B4GALT6Q9UBX8 382 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF69Q9UC07 566 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FXYD6-FXYD2A0A087WZ82 144 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 A0A1W2PRB8 838 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 TMEM218A2RU14 115 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 UBE2CO00762 179 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 HSD3B2P26439 372 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 RAB5BP61020 215 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 MAT1AQ00266 395 aaKnown RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 RNF212Q495C1 297 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 SFRP4Q6FHJ7 346 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FAM109BQ6ICB4 259 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 PGBD2Q6P3X8 592 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 CRIPAKQ8N1N5 446 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FAM98AQ8NCA5 519 aaKnown RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 THAP6Q8TBB0 222 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 SP7Q8TDD2 431 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 RXFP4Q8TDU9 374 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 PNPLA2Q96AD5 504 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 WDR89Q96FK6 387 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-203ENST00000554873 MS4A4EQ96PG1 132 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 SLC35A5Q9BS91 424 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 FXYD6Q9H0Q3 95 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 PIGMQ9H3S5 423 aa14.61□□□□□ -0.07
SYNE3-203ENST00000554873 MEX3AA1L020 520 aaKnown RBP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 C6orf47O95873 294 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 EFEMP2O95967 443 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF8P17098 575 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 CNR1P21554 472 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 ELAVL4P26378 380 aaKnown RBP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 LIM2P55344 173 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 EFNB1P98172 346 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms