RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CES1P1Q9UKY3 287 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 CFL2Q9Y281 166 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 ARHGAP21Q5T5U3 1957 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 MYO9AB2RTY4 2548 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 NPIPA2E9PIF3 369 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 NPIPA3F8WFD2 350 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 G3V2T6 193 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 TNFRSF21O75509 655 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 CLPSP04118 112 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 ATP1B1P05026 303 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 ADARB1P78563 741 aaKnown RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 FOXO1Q12778 655 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 MAP4K2Q12851 820 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 EPS8Q12929 822 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 APOFQ13790 326 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 GK3PQ14409 553 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 SLC10A1Q14973 349 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 MLC1Q15049 377 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 NTRK2Q16620 822 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 LRRC23Q53EV4 343 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 GCNT6Q5T4J0 391 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 KRT80Q6KB66 452 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 FAM180BQ6P0A1 224 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 TBPL2Q6SJ96 375 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 LYPD8Q6UX82 237 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 TMEM64Q6YI46 380 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 CCDC80Q76M96 950 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 ZDHHC21Q8IVQ6 265 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 SLC30A8Q8IWU4 369 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 SAMD14Q8IZD0 417 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 LRRC25Q8N386 305 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 ZNF615Q8N8J6 731 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 ZFP28Q8NHY6 868 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 PNPT1Q8TCS8 783 aaKnown RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 MAGEE2Q8TD90 523 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 PHF10Q8WUB8 498 aaKnown RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 DIO2Q92813 273 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 MARVELD3Q96A59 401 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 DOHHQ9BU89 302 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 OSBPL10Q9BXB5 764 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 TP63Q9H3D4 680 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 CXorf56Q9H5V9 222 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 SH2D2AQ9NP31 389 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 IL1RAPQ9NPH3 570 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 GIMAP4Q9NUV9 329 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 TAS2R7Q9NYW3 318 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 COQ3Q9NZJ6 369 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 EHD3Q9NZN3 535 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 FAF1Q9UNN5 650 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 PCDHGB5Q9Y5G0 923 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 NPFFR2Q9Y5X5 522 aa11.38□□□□□ -0.59
SHMT2-214ENST00000554604 CHCHD2Q9Y6H1 151 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-214ENST00000554604 APCP25054 2843 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 OR14I1A6ND48 311 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 H3BNH8 94 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 PLOD2O00469 737 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 GNGT2O14610 69 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 PDPK1O15530 556 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 H6PDO95479 791 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 CLDN14O95500 239 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ZNF682O95780 498 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ALPLP05186 524 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 MAN2A2P49641 1150 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 FBXW4P57775 412 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 RPP38P78345 283 aaKnown RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 PPP2R2BQ00005 443 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 EXOSC7Q15024 291 aaKnown RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ZNF630Q2M218 657 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 HYAL4Q2M3T9 481 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 PRICKLE4Q2TBC4 344 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 TMEM211Q6ICI0 200 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 FAM111BQ6SJ93 734 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 NCCRP1Q6ZVX7 275 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 USP51Q70EK9 711 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 STK32CQ86UX6 486 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 HIPK1Q86Z02 1210 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 PRR22Q8IZ63 422 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ZNF441Q8N8Z8 693 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 C17orf47Q8NEP4 570 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 PSMA8Q8TAA3 256 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 CA5BP1Q8WTZ4 195 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ADIPOR1Q96A54 375 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 EXOSC8Q96B26 276 aaKnown RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 CNRIP1Q96F85 164 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 RBM4BQ9BQ04 359 aaKnown RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 RBM4Q9BWF3 364 aaKnown RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 GABARAPL1Q9H0R8 117 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 NEUROD4Q9HD90 331 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ZFP64Q9NPA5 681 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ACSS1Q9NUB1 689 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-214ENST00000554604 GPATCH2Q9NW75 528 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ADPRHL2Q9NX46 363 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 NDUFA13Q9P0J0 144 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 B4GALT7Q9UBV7 327 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 MYRFQ9Y2G1 1151 aa11.37□□□□□ -0.59
SHMT2-214ENST00000554604 ADGRG4Q8IZF6 3080 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms