RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 VRK2Q86Y07 508 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 OR56B4Q8NH76 319 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 C19orf43Q9BQ61 176 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 ZDHHC5Q9C0B5 715 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 BTBD1Q9H0C5 482 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 HMX1Q9NP08 348 aaPredicted RBP15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 A4GALTQ9NPC4 353 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 PFDN2Q9UHV9 154 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 CFAP54Q96N23 3096 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 CACNA1IQ9P0X4 2223 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 L7N2F9 121 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 NARSO43776 548 aaKnown RBP15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 NFATC1O95644 943 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 PLATP00750 562 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 GNSP15586 552 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 RPL3P39023 403 aaKnown RBP15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 RPS7P62081 194 aaKnown RBP15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 FZD5Q13467 585 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 ZNF169Q14929 603 aaPredicted RBP15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 ETFDHQ16134 617 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 FCRLBQ6BAA4 426 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 ALKAL2Q6UX46 152 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 Q6ZTK2 550 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 CPXM2Q8N436 756 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 MORN4Q8NDC4 146 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 LGR4Q9BXB1 951 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 C6orf106Q9H6K1 298 aaPredicted RBP15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 MED9Q9NWA0 146 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 FBXL2Q9UKC9 423 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 FLVCR2Q9UPI3 526 aa15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 SIRT4Q9Y6E7 314 aaPredicted RBP15.79■□□□□ 0.12
PPP4R3A-202ENST00000554390 A0A087WUU8 490 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 SLC9B1P1A6NJY1 282 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 PIP5K1CO60331 668 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 TFP02787 698 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 WNT1P04628 370 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 ACP5P13686 325 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 C4BPBP20851 252 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 SNTB2Q13425 540 aaKnown RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 ZDHHC20Q5W0Z9 365 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 ZNF322Q6U7Q0 402 aaPredicted RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 IKBIPQ70UQ0 350 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 METTL3Q86U44 580 aaKnown RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 LRRC56Q8IYG6 542 aaPredicted RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 KCTD12Q96CX2 325 aaKnown RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 NEURL3Q96EH8 262 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 MRGPRX3Q96LB0 322 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 SGPP1Q9BX95 441 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 PDCD5O14737 125 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 UBXN7O94888 489 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 EPHA4P54764 986 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 SLC7A9P82251 487 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 RRM2BQ7LG56 351 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 SYT9Q86SS6 491 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 NPAS1Q99742 590 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 PELOQ9BRX2 385 aaKnown RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 GLIPR2Q9H4G4 154 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 RPS6KB2Q9UBS0 482 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 PRELID3BQ9Y3B1 194 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 RB1P06400 928 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 BSGP35613 385 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 NCBP2P52298 156 aaKnown RBP eCLIP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 SNRPNP63162 240 aaKnown RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 ZNF805Q5CZA5 627 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 MPP7Q5T2T1 576 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 KHDRBS2Q5VWX1 349 aaKnown RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 SPRED2Q7Z698 418 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 NKAIN4Q8IVV8 208 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 OR52N1Q8NH53 320 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 NXPE3Q969Y0 559 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 USB1Q9BQ65 265 aaKnown RBP15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 C20orf85Q9H1P6 137 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 SPHK2Q9NRA0 654 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 IRAK3Q9Y616 596 aa15.78■□□□□ 0.12
PPP4R3A-202ENST00000554390 PLSCR5A0PG75 271 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 ZNF98A6NK75 572 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 HIDE1A8MVS5 230 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 C4orf51C9J302 202 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 FOXE1O00358 373 aaPredicted RBP15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 SOCS6O14544 535 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 SPINT1O43278 529 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 FGF2P09038 288 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 MAPK9P45984 424 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 SLC25A35Q3KQZ1 300 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 BVESQ8NE79 360 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 DEFB118Q96PH6 123 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 ZNF607Q96SK3 696 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 UQCC2Q9BRT2 126 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 ACTR6Q9GZN1 396 aa15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 ING1Q9UK53 422 aaPredicted RBP15.77■□□□□ 0.12
PPP4R3A-202ENST00000554390 LILRB5O75023 590 aa15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 PEX14O75381 377 aa15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 HMGN2P05204 90 aaKnown RBP15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 GSTM3P21266 225 aa15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 TBXA2RP21731 343 aa15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 GALP22466 123 aa15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 ATP5A1P25705 553 aaKnown RBP15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 SLC16A1P53985 500 aa15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 SFRP4Q6FHJ7 346 aaPredicted RBP15.77■□□□□ 0.11
PPP4R3A-202ENST00000554390 SEZ6L2Q6UXD5 910 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms