RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CALHM2Q9HA72 323 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 MED11Q9P086 117 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 RPH3AQ9Y2J0 694 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 KIAA1549Q9HCM3 1950 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 POLQO75417 2590 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 A0A087WZY1 265 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 DUXAA6NLW8 204 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 CIB2O75838 187 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 AK1P00568 194 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
SHMT2-211ENST00000554310 PEPDP12955 493 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 PRF1P14222 555 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 IDO1P14902 403 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF17P17021 662 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 POU3F2P20265 443 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-211ENST00000554310 TCEA1P23193 301 aaKnown RBP11.82□□□□□ -0.52
SHMT2-211ENST00000554310 S100A3P33764 101 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 ATP4BP51164 291 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 IRX1P78414 480 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-211ENST00000554310 LRRC74AQ0VAA2 488 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 FAM174BQ3ZCQ3 159 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 NXNQ6DKJ4 435 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 MEX3BQ6ZN04 569 aaKnown RBP11.82□□□□□ -0.52
SHMT2-211ENST00000554310 ADGRE4PQ86SQ3 457 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 ANKRD46Q86W74 232 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 LIX1LQ8IVB5 337 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 POU5F2Q8N7G0 328 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF527Q8NB42 609 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 NAXEQ8NCW5 288 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 TNIP2Q8NFZ5 429 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 ZFP3Q96NJ6 502 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 OR7D2Q96RA2 312 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 UCN2Q96RP3 112 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 TM9SF2Q99805 663 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 TUBA1CQ9BQE3 449 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 PIGQQ9BRB3 760 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 HOXD1Q9GZZ0 328 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 DCLRE1BQ9H816 532 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 SLC24A3Q9HC58 644 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF629Q9UEG4 869 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-211ENST00000554310 GPR45Q9Y5Y3 372 aa11.82□□□□□ -0.52
SHMT2-211ENST00000554310 ANKRD17O75179 2603 aaKnown RBP11.81□□□□□ -0.52
SHMT2-211ENST00000554310 PCNX3Q9H6A9 2034 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 OR2M5A3KFT3 312 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 CLCA1A8K7I4 914 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 KDM4EB2RXH2 506 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-211ENST00000554310 HCRTR2O43614 444 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 AGR2O95994 175 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 UQCRC2P22695 453 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 STARP49675 285 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 EEFSECP57772 596 aaKnown RBP11.81□□□□□ -0.52
SHMT2-211ENST00000554310 RPS26P62854 115 aaKnown RBP11.81□□□□□ -0.52
SHMT2-211ENST00000554310 PHC1P78364 1004 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 SRYQ05066 204 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 SQLEQ14534 574 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 MAPRE2Q15555 327 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 TRMT5Q32P41 509 aaKnown RBP11.81□□□□□ -0.52
SHMT2-211ENST00000554310 PDCD4Q53EL6 469 aaKnown RBP11.81□□□□□ -0.52
SHMT2-211ENST00000554310 C6orf120Q7Z4R8 191 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 MEIOBQ8N635 442 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 GATSQ8NAP1 163 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 RELL2Q8NC24 303 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-211ENST00000554310 GLB1L3Q8NCI6 653 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-211ENST00000554310 OR5D16Q8NGK9 328 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 MIPOL1Q8TD10 442 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 WNT2BQ93097 391 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 CCDC115Q96NT0 180 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 ZBTB18Q99592 522 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 THTPAQ9BU02 230 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 SERHL2Q9H4I8 314 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 FBXO34Q9NWN3 711 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 NDE1Q9NXR1 346 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 CLCF1Q9UBD9 225 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 BTNL2Q9UIR0 455 aa11.81□□□□□ -0.52
SHMT2-211ENST00000554310 FBN2P35556 2912 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 DCHS2Q6V1P9 2916 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 C7orf72A4D263 438 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 H3BNH8 94 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 CPSF4O95639 269 aaKnown RBP11.8□□□□□ -0.52
SHMT2-211ENST00000554310 IL18BPO95998 194 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 PGRP06401 933 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 MATN1P21941 496 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 BMP5P22003 454 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 SSTR2P30874 369 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 OPRM1P35372 400 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 PEX19P40855 299 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 ASCL1P50553 236 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF41P51814 821 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF136P52737 540 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 DGKQP52824 942 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 NME5P56597 212 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 UFM1P61960 85 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 SLC25A3Q00325 362 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 CYLC2Q14093 348 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-211ENST00000554310 KPNB1Q14974 876 aaKnown RBP11.8□□□□□ -0.52
SHMT2-211ENST00000554310 CD226Q15762 336 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 GSTA3Q16772 222 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 TMEM44Q2T9K0 475 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms