RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 LILRA2Q8N149 483 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 OR7A2PQ8NGA2 310 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 PHOSPHO1Q8TCT1 267 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 OR5P2Q8WZ92 322 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 CDS1Q92903 461 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
CPSF2-203ENST00000554290 KLHL15Q96M94 604 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 HS3ST6Q96QI5 342 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 PRPF18Q99633 342 aaKnown RBP16.79■□□□□ 0.28
CPSF2-203ENST00000554290 SMR3AQ99954 134 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 TMEM185BQ9H7F4 350 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 TIGARQ9NQ88 270 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 FAF1Q9UNN5 650 aaPredicted RBP16.79■□□□□ 0.28
CPSF2-203ENST00000554290 LYPLA1O75608 230 aaPredicted RBP16.78■□□□□ 0.28
CPSF2-203ENST00000554290 NUDT14O95848 222 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 LINGO3P0C6S8 592 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 LAMP1P11279 417 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 ELK4P28324 431 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 SERPINB5P36952 375 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 CD226Q15762 336 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 SPDYE7PQ495Y7 208 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 ATP6AP1LQ52LC2 224 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 CDC73Q6P1J9 531 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 C22orf34Q6ZV56 151 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 PLEKHM3Q6ZWE6 761 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 OR56A1Q8NGH5 318 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 OR2W6PQ8NHA6 318 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 POC1BQ8TC44 478 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 AGR3Q8TD06 166 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 ADAMTS15Q8TE58 950 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 BDH2Q9BUT1 245 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 MECRQ9BV79 373 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 ACTRT3Q9BYD9 372 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 SLC17A7Q9P2U7 560 aa16.78■□□□□ 0.28
CPSF2-203ENST00000554290 PCNX3Q9H6A9 2034 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 GJE1A6NN92 205 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 GTPBP1O00178 669 aaKnown RBP16.77■□□□□ 0.28
CPSF2-203ENST00000554290 SLU7O95391 586 aaKnown RBP16.77■□□□□ 0.28
CPSF2-203ENST00000554290 THBDP07204 575 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 PRPS1L1P21108 318 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 LOXP28300 417 aaPredicted RBP16.77■□□□□ 0.28
CPSF2-203ENST00000554290 ADH6P28332 368 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 NR1H2P55055 460 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 ZNF117Q03924 483 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 IFFO1Q0D2I5 559 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 TP53BP2Q13625 1128 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 KLHL26Q53HC5 615 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 XKR7Q5GH72 579 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 C6orf136Q5SQH8 315 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 Q71RC1 249 aaPredicted RBP16.77■□□□□ 0.28
CPSF2-203ENST00000554290 PSMA8Q8TAA3 256 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 Q96MF0 132 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 OR10A4Q9H209 315 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 GIMAP2Q9UG22 337 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 GPR52Q9Y2T5 361 aa16.77■□□□□ 0.28
CPSF2-203ENST00000554290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.76■□□□□ 0.27
CPSF2-203ENST00000554290 KLF4O43474 513 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 NUDT17P0C025 328 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 AGTR1P30556 359 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 SFTPDP35247 375 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 P2RX1P51575 399 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 SUMO3P55854 103 aaPredicted RBP16.76■□□□□ 0.27
CPSF2-203ENST00000554290 PTGR1Q14914 329 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 RNPS1Q15287 305 aaKnown RBP16.76■□□□□ 0.27
CPSF2-203ENST00000554290 TMEM201Q5SNT2 666 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 DCST2Q5T1A1 773 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 ZCCHC23Q6ZST2 131 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 YTHDF3Q7Z739 585 aaKnown RBP16.76■□□□□ 0.27
CPSF2-203ENST00000554290 FNDC5Q8NAU1 212 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 TCP10LQ8TDR4 215 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 ROBO4Q8WZ75 1007 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 CPNE4Q96A23 557 aaPredicted RBP16.76■□□□□ 0.27
CPSF2-203ENST00000554290 MOAP1Q96BY2 351 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 COQ8BQ96D53 544 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 PERPQ96FX8 193 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 ACTR6Q9GZN1 396 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 C12orf49Q9H741 205 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 CXorf36Q9H7Y0 433 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 ACTL7BQ9Y614 415 aa16.76■□□□□ 0.27
CPSF2-203ENST00000554290 GPC6Q9Y625 555 aaPredicted RBP16.76■□□□□ 0.27
CPSF2-203ENST00000554290 ZNF195O14628 629 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 CFLARO15519 480 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 SPAG7O75391 227 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 C6orf47O95873 294 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 HEXAP06865 529 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 PSMB1P20618 241 aaKnown RBP16.75■□□□□ 0.27
CPSF2-203ENST00000554290 ATP12AP54707 1039 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 FOXF1Q12946 379 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 ZNF239Q16600 458 aaKnown RBP16.75■□□□□ 0.27
CPSF2-203ENST00000554290 IL23RQ5VWK5 629 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 BHLHB9Q6PI77 547 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 STEAP2Q8NFT2 490 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 FBXO27Q8NI29 283 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 SFXN5Q8TD22 340 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 RNF128Q8TEB7 428 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 TUBGCP3Q96CW5 907 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 COX4I2Q96KJ9 171 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 C3orf30Q96M34 536 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 KLHDC3Q9BQ90 382 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 C1orf50Q9BV19 199 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms