RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 MRPL48Q96GC5 212 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC41A3Q96GZ6 507 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 FAM46AQ96IP4 442 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ZSWIM3Q96MP5 696 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 IL17FQ96PD4 163 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 TIMP4Q99727 224 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 UTP23Q9BRU9 249 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 THAP7Q9BT49 309 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 NDC1Q9BTX1 674 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ALG8Q9BVK2 526 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 TEX101Q9BY14 249 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF350Q9GZX5 532 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 AICDAQ9GZX7 198 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 MED28Q9H204 178 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ABCG5Q9H222 651 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 UBQLN3Q9H347 655 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 MTHFD2LQ9H903 347 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ERVMER34-1Q9H9K5 563 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ZFP64Q9NPA5 681 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 PRDM7Q9NQW5 492 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SEMA4GQ9NTN9 838 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 MED9Q9NWA0 146 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 AKAP7Q9P0M2 348 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 H2AFY2Q9P0M6 372 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 PTGFRNQ9P2B2 879 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF443Q9Y2A4 671 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC35A3Q9Y2D2 325 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 CHST2Q9Y4C5 530 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 HSPB11Q9Y547 144 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 CACNG2Q9Y698 323 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 CLCA3PQ9Y6N3 262 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 LRRK1Q38SD2 2015 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 A0A087WV62 115 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 MEIKINA0A087WXM9 373 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 TBC1D3EA0A087X179 549 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 LOC102723532A0A0G2JNH3 316 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 LINC00854A0A1B0GVQ3 168 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 A0A1W2PP55 124 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 A0A1W2PR48 441 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 FAM86C2PA6NEL3 165 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 UNC119BA6NIH7 251 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 C12orf71A8MTZ7 269 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 LEUTXA8MZ59 168 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 LRRN3E7EW58 273 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 H7BY64 318 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 BET1O15155 118 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ST8SIA5O15466 376 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 CCL16O15467 120 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 OGG1O15527 345 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ERI3O43414 337 aaKnown RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 SULT1B1O43704 296 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 GPRIN2O60269 458 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 RNGTTO60942 597 aaKnown RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ARL6IP5O75915 188 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC22A5O76082 557 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 LYPD3O95274 346 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 TGM6O95932 706 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 IFNA7P01567 189 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 RAF1P04049 648 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 EIF4EP06730 217 aaKnown RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 DBIP07108 87 aaKnown RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 UCHL1P09936 223 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ZGLP1P0C6A0 271 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 NID1P14543 1247 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 GJA1P17302 382 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 TBXA2RP21731 343 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC2A5P22732 501 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 EVI2BP34910 448 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 CD79BP40259 229 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 BCL6P41182 706 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 MECP2P51608 486 aaKnown RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 AGFG1P52594 562 aaKnown RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF136P52737 540 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 CCL23P55773 120 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 NRG3P56975 720 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 AP3S2P59780 193 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 HTRA4P83105 476 aaPredicted RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 TNFRSF17Q02223 184 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 PLAURQ03405 335 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 CSTF1Q05048 431 aaKnown RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 SPEM2Q0P670 501 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 MAPK14Q16539 360 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 NTRK2Q16620 822 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ISXQ2M1V0 245 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 KLHL12Q53G59 568 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 CEP78Q5JTW2 689 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF57Q68EA5 555 aaPredicted RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 DMKNQ6E0U4 476 aaPredicted RBP4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ARHGAP11AQ6P4F7 1023 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF613Q6PF04 617 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 TEX261Q6UWH6 196 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 OVCH1Q7RTY7 1134 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 GDF7Q7Z4P5 450 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 DEFB128Q7Z7B8 93 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 LUZP2Q86TE4 346 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 LHFPL3Q86UP9 236 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 C11orf74Q86VG3 221 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 NR2C2APQ86WQ0 139 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 KLBQ86Z14 1044 aa4.88□□□□□ -1.63
TMEM55B-204ENST00000553602 CPOQ8IVL8 374 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms