RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 PIP5KL1Q5T9C9 394 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 C11orf57Q6ZUT1 292 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 ADCK2Q7Z695 626 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 TMEM135Q86UB9 458 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 CROCCP3Q8IVE0 287 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 FGFRL1Q8N441 504 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 CCDC185Q8N715 623 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 FAM184AQ8NB25 1140 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 CSNK1G2-AS1Q8NCQ2 148 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 OR52K2Q8NGK3 314 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 VPS33AQ96AX1 596 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 ALKBH7Q9BT30 221 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 ULBP1Q9BZM6 244 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 FAM129AQ9BZQ8 928 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 C10orf88Q9H8K7 445 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 RDH14Q9HBH5 336 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 IARS2Q9NSE4 1012 aaKnown RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 SNX7Q9UNH6 387 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 EXOC7Q9UPT5 735 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 RUVBL2Q9Y230 463 aaKnown RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 ITM2BQ9Y287 266 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 CCL27Q9Y4X3 112 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 UBE4BO95155 1302 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 CROCCQ5TZA2 2017 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 FAM170AA1A519 330 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 KLLNB2CW77 178 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 KPNA3O00505 521 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-217ENST00000553287 INPP4BO15327 924 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 CSF2P04141 144 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 CCDC175P0C221 793 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 SPP1P10451 314 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 SFTPCP11686 197 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 PDGFRAP16234 1089 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-217ENST00000553287 TKTL1P51854 596 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 RIDAP52758 137 aaKnown RBP3.6□□□□□ -1.83
ATXN3-217ENST00000553287 ASIC1P78348 528 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 POU5F1Q01860 360 aaKnown RBP3.6□□□□□ -1.83
ATXN3-217ENST00000553287 ZNF273Q14593 569 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 C16orf72Q14CZ0 275 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 PSMD6Q15008 389 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 HYAL4Q2M3T9 481 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 C6orf136Q5SQH8 315 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 AGAP7PQ5VUJ5 663 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 SLC30A6Q6NXT4 461 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 RPUSD3Q6P087 351 aaKnown RBP3.6□□□□□ -1.83
ATXN3-217ENST00000553287 FAM173BQ6P4H8 233 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 CCDC186Q7Z3E2 898 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 COX8CQ7Z4L0 72 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 TRIM69Q86WT6 500 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 RTL3Q8N8U3 475 aaKnown RBP3.6□□□□□ -1.83
ATXN3-217ENST00000553287 FIBINQ8TAL6 211 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 UBA3Q8TBC4 463 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 GRK7Q8WTQ7 553 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 LURAP1Q96LR2 239 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 CTRCQ99895 268 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 CENPOQ9BU64 300 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 OCR1Q9BZK8 76 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 C3orf14Q9HBI5 128 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 AGPAT3Q9NRZ7 376 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 COMMD8Q9NX08 183 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 APOBEC3BQ9UH17 382 aaKnown RBP3.6□□□□□ -1.83
ATXN3-217ENST00000553287 SCML1Q9UN30 329 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 AUP1Q9Y679 476 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 HCFC1P51610 2035 aa3.6□□□□□ -1.83
ATXN3-217ENST00000553287 F8P00451 2351 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 DNHD1Q96M86 4753 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 SYNJ2BP-COX16A0A087WUM0 186 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 SPTY2D1-AS1A0A0U1RR47 76 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 IGLON5A6NGN9 336 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 RPL37AP8A6NKH3 93 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 TCP11X1B4DZS4 312 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 D6RAR5 112 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 PRSS46E5RG02 174 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 E5RGE8 158 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 NVLO15381 856 aaKnown RBP3.59□□□□□ -1.83
ATXN3-217ENST00000553287 SIGLEC5O15389 551 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 ACSL4O60488 711 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 HNRNPA2B1P22626 353 aaKnown RBP3.59□□□□□ -1.83
ATXN3-217ENST00000553287 F8A1P23610 371 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 AKT2P31751 481 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 HNRNPH3P31942 346 aaKnown RBP3.59□□□□□ -1.83
ATXN3-217ENST00000553287 UGT1A3P35503 534 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 ADIGQ0VDE8 80 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 TNK1Q13470 666 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 SIX1Q15475 284 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-217ENST00000553287 C3AR1Q16581 482 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 GOLGA7BQ2TAP0 167 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 RNF212Q495C1 297 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 NADK2Q4G0N4 442 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 LBHQ53QV2 105 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-217ENST00000553287 KRBOX4Q5JUW0 171 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 C1orf220Q5T0J3 134 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 C9orf66Q5T8R8 295 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 NKAIN2Q5VXU1 208 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 ABI3BPQ7Z7G0 1075 aa3.59□□□□□ -1.83
ATXN3-217ENST00000553287 PCGF5Q86SE9 256 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms