RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 MANSC1Q9H8J5 431 aa14.28□□□□□ -0.12
CDK4-215ENST00000553237 RNF122Q9H9V4 155 aa14.28□□□□□ -0.12
CDK4-215ENST00000553237 HHATLQ9HCP6 504 aa14.28□□□□□ -0.12
CDK4-215ENST00000553237 NEUROD4Q9HD90 331 aa14.28□□□□□ -0.12
CDK4-215ENST00000553237 CELSR1Q9NYQ6 3014 aa14.28□□□□□ -0.12
CDK4-215ENST00000553237 STOML1Q9UBI4 398 aa14.28□□□□□ -0.12
CDK4-215ENST00000553237 A0A1W2PQD3 144 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 CASKO14936 926 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 SNNO75324 88 aaPredicted RBP14.27□□□□□ -0.13
CDK4-215ENST00000553237 CD1EP15812 388 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 DNASE1P24855 282 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 C21orf58P58505 322 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 ZNF117Q03924 483 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 SMU1Q2TAY7 513 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 NDUFAF6Q330K2 333 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 KLHL26Q53HC5 615 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 C6orf120Q7Z4R8 191 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 CAMKMTQ7Z624 323 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 GOLGA6L1Q8N7Z2 621 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 ZNF614Q8N883 585 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 ZNF610Q8N9Z0 462 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 OR10D3Q8NH80 312 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 RAB3IL1Q8TBN0 382 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 POC1BQ8TC44 478 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 NINJ1Q92982 152 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 ZBTB8AQ96BR9 441 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 MOAP1Q96BY2 351 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 DPY30Q9C005 99 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 HOXD1Q9GZZ0 328 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 VIPAS39Q9H9C1 493 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 ASIC5Q9NY37 505 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 NDRG3Q9UGV2 375 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 CLEC4AQ9UMR7 237 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 CARD8Q9Y2G2 431 aa14.27□□□□□ -0.13
CDK4-215ENST00000553237 PRRC2AP48634 2157 aaKnown RBP14.27□□□□□ -0.13
CDK4-215ENST00000553237 GTPBP1O00178 669 aaKnown RBP14.26□□□□□ -0.13
CDK4-215ENST00000553237 TNFSF11O14788 317 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 CXCL13O43927 109 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 NUDT14O95848 222 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 IL11P20809 199 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 MATN1P21941 496 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 PSMA4P25789 261 aaKnown RBP14.26□□□□□ -0.13
CDK4-215ENST00000553237 KCNJ5P48544 419 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 ATP12AP54707 1039 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 CASP9P55211 416 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 RAC1P63000 192 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDK4-215ENST00000553237 BHLHB9Q6PI77 547 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 CBLN3Q6UW01 205 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 OLIG3Q7RTU3 272 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 ANKRD46Q86W74 232 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 ZNF527Q8NB42 609 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 OR4A15Q8NGL6 344 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 ADGRG7Q96K78 797 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 WFIKKN1Q96NZ8 548 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 SERHL2Q9H4I8 314 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 KLHL28Q9NXS3 571 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
CDK4-215ENST00000553237 PROCRQ9UNN8 238 aa14.26□□□□□ -0.13
CDK4-215ENST00000553237 A0A0J9YW62 118 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 RNF103-CHMP3A0A140T963 221 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 C7orf72A4D263 438 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 H3BNH8 94 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 CPSF4O95639 269 aaKnown RBP14.25□□□□□ -0.13
CDK4-215ENST00000553237 CGAP01215 116 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 HRGP04196 525 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 LINGO3P0C6S8 592 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 POU2F1P14859 743 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 LBPP18428 481 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 ME2P23368 584 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 SHC1P29353 583 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 SFTPDP35247 375 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 CD79BP40259 229 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 PHC1P78364 1004 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 OCRLQ01968 901 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 FOXF1Q12946 379 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 EXOC3L2Q2M3D2 409 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 CTU2Q2VPK5 515 aaKnown RBP14.25□□□□□ -0.13
CDK4-215ENST00000553237 HBMQ6B0K9 141 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 FAM214BQ7L5A3 538 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 MTERF4Q7Z6M4 381 aaKnown RBP14.25□□□□□ -0.13
CDK4-215ENST00000553237 LILRA2Q8N149 483 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 OR2V1Q8NHB1 315 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 RFWD2Q8NHY2 731 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 ZNF75CPQ92670 426 aaPredicted RBP14.25□□□□□ -0.13
CDK4-215ENST00000553237 SDF2Q99470 211 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 FOXC2Q99958 501 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 SLC39A3Q9BRY0 314 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 PLEKHF2Q9H8W4 249 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 MEAF6Q9HAF1 191 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 PCDHGB4Q9UN71 923 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 EDARQ9UNE0 448 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 DTNAQ9Y4J8 743 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 MED13LQ71F56 2210 aa14.25□□□□□ -0.13
CDK4-215ENST00000553237 HRNRQ86YZ3 2850 aaPredicted RBP14.24□□□□□ -0.13
CDK4-215ENST00000553237 UQCRHLA0A096LP55 91 aa14.24□□□□□ -0.13
CDK4-215ENST00000553237 NPIPB9F8W1W9 429 aa14.24□□□□□ -0.13
CDK4-215ENST00000553237 RNASET2O00584 256 aaKnown RBP14.24□□□□□ -0.13
CDK4-215ENST00000553237 ADAMDEC1O15204 470 aa14.24□□□□□ -0.13
CDK4-215ENST00000553237 EFNA2O43921 213 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms