RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 C1orf220Q5T0J3 134 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 BEND3Q5T5X7 828 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 C1orf185Q5T7R7 199 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 ZNF57Q68EA5 555 aaPredicted RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 OR2A2Q6IF42 318 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 KIAA1161Q6NSJ0 714 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 VITQ6UXI7 678 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 KDM7AQ6ZMT4 941 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 Q8N9G6 341 aaPredicted RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 C9orf106Q8NAJ2 232 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 OR1L4Q8NGR5 311 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 AGR3Q8TD06 166 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 ST8SIA1Q92185 356 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 C10orf35Q96D05 121 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 C9orf85Q96MD7 179 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 RBM14Q96PK6 669 aaKnown RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 NUP58Q9BVL2 599 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 SPATA16Q9BXB7 569 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 ABCC13Q9NSE7 274 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 ELOVL2Q9NXB9 296 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 EHFQ9NZC4 300 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 NUDT4Q9NZJ9 180 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 CA5BQ9Y2D0 317 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 AK6Q9Y3D8 172 aaKnown RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 MAD1L1Q9Y6D9 718 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 TTC41PQ6P2S7 1318 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 IGHV2-70DA0A0C4DH43 119 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 RPL37AP8A6NKH3 93 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 PP2D1A8MPX8 630 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 PDHXO00330 501 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 RS1O15537 224 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 LRRTM2O43300 516 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 IDH3BO43837 385 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 N4BP1O75113 896 aaKnown RBP3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 ZNF432O94892 652 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 LRATO95237 230 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 ALPIP09923 528 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 ETS2P15036 469 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 PVRP15151 417 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 IMPDH1P20839 514 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 UGT1A4P22310 534 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 LMO2P25791 158 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 ARHGDIAP52565 204 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 LIM2P55344 173 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 RND3P61587 244 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 GSTO1P78417 241 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 OTUD4Q01804 1114 aaKnown RBP3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 ST3GAL3Q11203 375 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 IL18R1Q13478 541 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 PEX6Q13608 980 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 DPYSL2Q16555 572 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 CYP51A1Q16850 503 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 C14orf28Q4W4Y0 310 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 VWA2Q5GFL6 755 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 FAM182AQ5T1J6 154 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 C9orf66Q5T8R8 295 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 LGSNQ5TDP6 509 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 LRRC66Q68CR7 880 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 REP15Q6BDI9 236 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 C18orf65Q6ZTR6 163 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 PAQR7Q86WK9 346 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 EGFL6Q8IUX8 553 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 DHRSXQ8N5I4 330 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 KIR3DL3Q8N743 410 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 Q8NBF4 154 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 FAM83FQ8NEG4 500 aaPredicted RBP3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 BEST4Q8NFU0 473 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 OR6C4Q8NGE1 309 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 RFESDQ8TAC1 157 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 ADAMTS16Q8TE57 1224 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 ZNF670Q9BS34 389 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 FGFBP2Q9BYJ0 223 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 NXF5Q9H1B4 397 aaKnown RBP3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 RHBGQ9H310 441 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 AZI2Q9H6S1 392 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 EXO5Q9H790 373 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 SP140LQ9H930 580 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 AMBNQ9NP70 447 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 EXOSC3Q9NQT5 275 aaKnown RBP3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 RNF24Q9Y225 148 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 NTNG1Q9Y2I2 539 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 NPTNQ9Y639 398 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 ALG6Q9Y672 507 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 AUP1Q9Y679 476 aa3.26□□□□□ -1.89
LSM6P2-201ENST00000552208 RPAP1Q9BWH6 1393 aaPredicted RBP3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 A0A075B6Q4 140 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 HEATR9A2RTY3 570 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 BTBD17A6NE02 478 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 LRRIQ4A6NIV6 560 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 SAGE2PA6NJ88 616 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 IFITM10A6NMD0 228 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 FAM220BPB1ANY3 271 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 H3BMQ9 156 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 RAMP3O60896 148 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 CST1P01037 141 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 ALOX5P09917 674 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 HSMCR30P0CW71 290 aa3.25□□□□□ -1.89
LSM6P2-201ENST00000552208 UMPSP11172 480 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms