RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CACNA1HO95180 2353 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 VSTM2BA6NLU5 285 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 IL33O95760 270 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 MT-ND2P03891 347 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 ITIH1P19827 911 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 EMX1Q04741 257 aaPredicted RBP18.12■□□□□ 0.49
SSH1-209ENST00000551165 TSPAN31Q12999 210 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 GINS1Q14691 196 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 C12orf73Q69YU5 71 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 PTCHD4Q6ZW05 846 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 GPR141Q7Z602 305 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 DEPDC4Q8N2C3 294 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 LHPPQ9H008 270 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 SCN3BQ9NY72 215 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 NDUFA13Q9P0J0 144 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 TPRKBQ9Y3C4 175 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 A0A1B0GWA3 101 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 PMS2P1A4D2B8 440 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 KLF4O43474 513 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 ALOX12BO75342 701 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 RFPL3O75679 317 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 CSTAP01040 98 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 CD59P13987 128 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 MASP1P48740 699 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 ZBED5Q49AG3 693 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 ZNF524Q96C55 264 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 NAA50Q9GZZ1 169 aaKnown RBP18.11■□□□□ 0.49
SSH1-209ENST00000551165 GPR83Q9NYM4 423 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 TTC36A6NLP5 189 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 FMO6PO60774 539 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 UTS2O95399 124 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 GIPRP48546 466 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 IL11RAQ14626 422 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 CLPPQ16740 277 aaPredicted RBP18.11■□□□□ 0.49
SSH1-209ENST00000551165 CLEC12AQ5QGZ9 265 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 CACTIN-AS1Q8N1I8 211 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 CADM2Q8N3J6 435 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 GGHQ92820 318 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 FKBP10Q96AY3 582 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 ZNF559Q9BR84 538 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 TVP23BQ9NYZ1 205 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 COPS7AQ9UBW8 275 aa18.11■□□□□ 0.49
SSH1-209ENST00000551165 A0A0B4J2E0 115 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 A0A1B0GX12 115 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 GNB5O14775 395 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 FLRT2O43155 660 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 ICOSLGO75144 302 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 REM1O75628 298 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 INMTO95050 263 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 ADRA2AP08913 450 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 MAKP20794 623 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 C21orf33P30042 268 aaPredicted RBP18.1■□□□□ 0.49
SSH1-209ENST00000551165 EMP2P54851 167 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 GTF2IRD2BQ6EKJ0 949 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 BORAQ6PGQ7 559 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 CBLN3Q6UW01 205 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 KIRREL2Q6UWL6 708 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 GTF2IRD2Q86UP8 949 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 CLVS1Q8IUQ0 354 aaPredicted RBP18.1■□□□□ 0.49
SSH1-209ENST00000551165 APCDD1LQ8NCL9 501 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 NFAM1Q8NET5 270 aaPredicted RBP18.1■□□□□ 0.49
SSH1-209ENST00000551165 THAP3Q8WTV1 239 aaPredicted RBP18.1■□□□□ 0.49
SSH1-209ENST00000551165 TMEM239Q8WW34 195 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 WDR77Q9BQA1 342 aaPredicted RBP18.1■□□□□ 0.49
SSH1-209ENST00000551165 DPH1Q9BZG8 443 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 MEPEQ9NQ76 525 aaPredicted RBP18.1■□□□□ 0.49
SSH1-209ENST00000551165 PSORS1C1Q9UIG5 152 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 CFL2Q9Y281 166 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 PCDHGB2Q9Y5G2 931 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 SYNDIG1LA6NDD5 238 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 PRKYO43930 277 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 ONECUT2O95948 504 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 GP1BAP07359 652 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 NGFRP08138 427 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 JUNBP17275 347 aaPredicted RBP18.1■□□□□ 0.49
SSH1-209ENST00000551165 CDK5Q00535 292 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 TRA2AQ13595 282 aaKnown RBP eCLIP18.1■□□□□ 0.49
SSH1-209ENST00000551165 FNDC7Q5VTL7 733 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 SLCO6A1Q86UG4 719 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 TCEANCQ8N8B7 351 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 TMEM27Q9HBJ8 222 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 UBQLN4Q9NRR5 601 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 C14orf105Q9NVL8 296 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 DNAJC27Q9NZQ0 273 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 SNX5Q9Y5X3 404 aa18.1■□□□□ 0.49
SSH1-209ENST00000551165 ZNF354AO60765 605 aaPredicted RBP18.09■□□□□ 0.49
SSH1-209ENST00000551165 CPNE3O75131 537 aaKnown RBP18.09■□□□□ 0.49
SSH1-209ENST00000551165 ENTPD6O75354 484 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 GSTM3P21266 225 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 PAX7P23759 505 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 IFNGR2P38484 337 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 MLLT10P55197 1068 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 MC2RQ01718 297 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 GPR107Q5VW38 600 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 HLA-DQA1Q5Y7H0 255 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 MRPL14Q6P1L8 145 aaKnown RBP18.09■□□□□ 0.49
SSH1-209ENST00000551165 ZNF441Q8N8Z8 693 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 FAR1Q8WVX9 515 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 ART5Q96L15 291 aa18.09■□□□□ 0.49
SSH1-209ENST00000551165 SIGLEC11Q96RL6 698 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms