RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ASAH1Q13510 395 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 DEFB110Q30KQ9 67 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 PLEKHM3Q6ZWE6 761 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 KIF18BQ86Y91 864 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 CPOQ8IVL8 374 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 SLC38A6Q8IZM9 456 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 OR8H3Q8N146 312 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 SLC16A11Q8NCK7 471 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ANKK1Q8NFD2 765 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 TTLQ8NG68 377 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 OR8D4Q8NGM9 314 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 TMEM255BQ8WV15 326 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 PATE1Q8WXA2 126 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 OMA1Q96E52 524 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 FOXN4Q96NZ1 517 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 CHIAQ9BZP6 476 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 LHX9Q9NQ69 397 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 NLGN3Q9NZ94 848 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 TBC1D29Q9UFV1 150 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 KLF15Q9UIH9 416 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 COLEC10Q9Y6Z7 277 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 A0A1W2PRG6 482 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 INMT-MINDY4F8WBC2 141 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 FAAHO00519 579 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 CRYZL1O95825 349 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 PRG2P13727 222 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 AKT2P31751 481 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 SNRPGP62308 76 aaKnown RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ZMYND11Q15326 602 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 SMAD2Q15796 467 aaKnown RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 METAP1DQ6UB28 335 aaPredicted RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF793Q6ZN11 406 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 GATSQ8NAP1 163 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 SAMD8Q96LT4 415 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF607Q96SK3 696 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ENKD1Q9H0I2 346 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 FBXO34Q9NWN3 711 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 EXTL2Q9UBQ6 330 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 A0A087WUU8 490 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 IQCMA0A1B0GVH7 501 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 BTN3A3O00478 584 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 SEMA4FO95754 770 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 IGHV4-34P06331 123 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ASGR2P07307 311 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 PRKAR1AP10644 381 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 PEBP1P30086 187 aaKnown RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 IFNA8P32881 189 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 NAA10P41227 235 aaPredicted RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 P2RX3P56373 397 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 CDC73Q6P1J9 531 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ENPP7Q6UWV6 458 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 SYT13Q7L8C5 426 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 UBE3DQ7Z6J8 389 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 RDH10Q8IZV5 341 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 FBXL6Q8N531 539 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 NATD1Q8N6N6 113 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF433Q8N7K0 673 aaPredicted RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 OR4M1Q8NGD0 313 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 MAP6Q96JE9 813 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF354BQ96LW1 612 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 OR6C2Q9NZP2 312 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 NPAP1Q9NZP6 1156 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 TRAV27A0A087WT01 109 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 C4orf51C9J302 202 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 FABP7O15540 132 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 EEF1E1O43324 174 aaKnown RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 DOK2O60496 412 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 IL1AP01583 271 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 TP53P04637 393 aaPredicted RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 LIMS3P0CW19 117 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 LIMS4P0CW20 117 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ARSBP15848 533 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 TRHRP34981 398 aaPredicted RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 NUDT1P36639 197 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 KCNJ5P48544 419 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 TRA2BP62995 288 aaKnown RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 TDGQ13569 410 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 NRROSQ86YC3 692 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 SPRYD4Q8WW59 207 aaPredicted RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 MICU1Q9BPX6 476 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 PPIL3Q9H2H8 161 aaKnown RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 SYNPO2LQ9H987 977 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 POLMQ9NP87 494 aaPredicted RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 SLC6A20Q9NP91 592 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ACOXLQ9NUZ1 547 aa10.32□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF346Q9UL40 294 aaKnown RBP10.32□□□□□ -0.76
LINC00661-204ENST00000549354 TRIOBPQ9H2D6 2365 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 DSPPQ9NZW4 1301 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 CIB4A0PJX0 185 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 J3QLW9 94 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 RAD1O60671 282 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 EML2O95834 649 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF19P17023 458 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 DDCP20711 480 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 RPS27P42677 84 aaKnown RBP10.31□□□□□ -0.76
LINC00661-204ENST00000549354 FRKP42685 505 aaPredicted RBP10.31□□□□□ -0.76
LINC00661-204ENST00000549354 OR3A3P47888 321 aa10.31□□□□□ -0.76
LINC00661-204ENST00000549354 AGFG1P52594 562 aaKnown RBP10.31□□□□□ -0.76
LINC00661-204ENST00000549354 TFF2Q03403 129 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms