RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 THY1P04216 161 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 PSMB10P40306 273 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 HTR3AP46098 478 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 STX4Q12846 297 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 ZSWIM7Q19AV6 140 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 FBXO46Q6PJ61 603 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 OAFQ86UD1 273 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 RANBP3LQ86VV4 465 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 IL17RCQ8NAC3 791 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 RPLP0P6Q8NHW5 317 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 CNOT9Q92600 299 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 OSTF1Q92882 214 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 FOXN4Q96NZ1 517 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 SRRQ9GZT4 340 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF346Q9UL40 294 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 HRKO00198 91 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 IMPA2O14732 288 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 AKAP8O43823 692 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 FCARP24071 287 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 SRP9P49458 86 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 CDK5Q00535 292 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF267Q14586 743 aaPredicted RBP12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 OR1Q1Q15612 314 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 DCST2Q5T1A1 773 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 ARMC6Q6NXE6 501 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 WDR88Q6ZMY6 472 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 Q6ZSR6 202 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 TIGD4Q8IY51 512 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 OR4C6Q8NH72 309 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 DIO2Q92813 273 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 GCDHQ92947 438 aaPredicted RBP12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 ACTR10Q9NZ32 417 aa12.71□□□□□ -0.37
PRPF40B-209ENST00000548825 WDFY4Q6ZS81 3184 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 TCRBV21S2A2A0A5A6 115 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 DUXAA6NLW8 204 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 PRR23D1E9PI22 279 aaPredicted RBP12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 OR5F1O95221 314 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 CT62P0C5K7 136 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 PRR23D2P0DMB1 279 aaPredicted RBP12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 OR12D2P58182 307 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 RAB40BQ12829 278 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 CRMP1Q14194 572 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 NDUFA9Q16795 377 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 PLK5Q496M5 336 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 LCN1P1Q5VSP4 162 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 CEACAM19Q7Z692 300 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 TMEM239Q8WW34 195 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 TXNDC15Q96J42 360 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 FRMD6Q96NE9 622 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 TNFRSF13CQ96RJ3 184 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 SDF2Q99470 211 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 RAB11FIP5Q9BXF6 653 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 TPSD1Q9BZJ3 242 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 SIDT1Q9NXL6 827 aaKnown RBP12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 SPACA6W5XKT8 324 aa12.71□□□□□ -0.38
PRPF40B-209ENST00000548825 A0A0G2JMP0 313 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 A0A0X1KG70 313 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 K7EQS6 105 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 EEF1E1O43324 174 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 HLA-DPB1P04440 258 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 ALAS2P22557 587 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 OMPP47874 163 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 E2F1Q01094 437 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 OCLNQ16625 522 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 OOSP2Q86WS3 158 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 LRRC17Q8N6Y2 441 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 OR4M2Q8NGB6 313 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 OR52E2Q8NGJ4 325 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 PCNPQ8WW12 178 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 RBM18Q96H35 190 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 C4orf36Q96KX1 117 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 MS4A4EQ96PG1 132 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 C1QTNF2Q9BXJ5 285 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 HOXD1Q9GZZ0 328 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 CYP8B1Q9UNU6 501 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 SIRT4Q9Y6E7 314 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 UNC119BA6NIH7 251 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 BLOC1S5-TXNDC5H3BN57 136 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 TALDO1P37837 337 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 RPS27P42677 84 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 TMEM64Q6YI46 380 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 NATD1Q8N6N6 113 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 ACBD7Q8N6N7 88 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 AVL9Q8NBF6 648 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 MFSD9Q8NBP5 474 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 BEST4Q8NFU0 473 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 OR52R1Q8NGF1 315 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF671Q8TAW3 534 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 AP3S1Q92572 193 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 BPIFA2Q96DR5 249 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 WDR92Q96MX6 357 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 ERMAPQ96PL5 475 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 MTHFD2LQ9H903 347 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 GDE1Q9NZC3 331 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 RPS6KB2Q9UBS0 482 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 ADAM18Q9Y3Q7 739 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 BMP8BP34820 402 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
PRPF40B-209ENST00000548825 TATDN3Q17R31 274 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms