RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PABPC4LP0CB38 370 aaKnown RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 BGNP21810 368 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 MATN1P21941 496 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 DNASE1P24855 282 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 ELK4P28324 431 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 SOAT1P35610 550 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 CPOXP36551 454 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 KIR2DL2P43627 348 aaPredicted RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 EIF1AXP47813 144 aaKnown RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 P2RX1P51575 399 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 ART1P52961 327 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 CLNS1AP54105 237 aaKnown RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 LRRC74AQ0VAA2 488 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 PLPPR5Q32ZL2 321 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 OR4F3Q6IEY1 312 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 OGFOD2Q6N063 350 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 FAM214BQ7L5A3 538 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 C6orf120Q7Z4R8 191 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 ZAR1Q86SH2 424 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 GGNQ86UU5 652 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 CDC20BQ86Y33 519 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 GATSQ8NAP1 163 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 OIT3Q8WWZ8 545 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 OTUB1Q96FW1 271 aaPredicted RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 SH3YL1Q96HL8 342 aaPredicted RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 REXO5Q96IC2 774 aaKnown RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 GMPPAQ96IJ6 420 aaPredicted RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 PPP1R36Q96LQ0 422 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 OR7D2Q96RA2 312 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 SORT1Q99523 831 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 FOXC2Q99958 501 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 PAIP2Q9BPZ3 127 aaKnown RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 NUF2Q9BZD4 464 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 C20orf27Q9GZN8 174 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 ZNF395Q9H8N7 513 aaPredicted RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 MEAF6Q9HAF1 191 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 EXD2Q9NVH0 621 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 THAP1Q9NVV9 213 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 ZNF226Q9NYT6 803 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 ST6GALNAC2Q9UJ37 374 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 EMC9Q9Y3B6 208 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 DTNAQ9Y4J8 743 aa10.24□□□□□ -0.77
BEST3-209ENST00000548658 GPC6Q9Y625 555 aaPredicted RBP10.24□□□□□ -0.77
BEST3-209ENST00000548658 SH3D21A4FU49 640 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 TRPC5OSA6NMA1 111 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 SLCO1B7G3V0H7 640 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 H0YC42 278 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 EIF4E2O60573 245 aaKnown RBP10.23□□□□□ -0.77
BEST3-209ENST00000548658 STX11O75558 287 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 GUSBP08236 651 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 LINGO3P0C6S8 592 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 IL11P20809 199 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 UQCRC2P22695 453 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 PSMA4P25789 261 aaKnown RBP10.23□□□□□ -0.77
BEST3-209ENST00000548658 CD79BP40259 229 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 KCNJ5P48544 419 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 IST1P53990 364 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 TPD52P55327 224 aaPredicted RBP10.23□□□□□ -0.77
BEST3-209ENST00000548658 BST1Q10588 318 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 MPP2Q14168 576 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 CD226Q15762 336 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 ATAD3BQ5T9A4 648 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 ATG16L1Q676U5 607 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 PLXDC2Q6UX71 529 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 BTLAQ7Z6A9 289 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 LILRA2Q8N149 483 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 CHDHQ8NE62 594 aaPredicted RBP10.23□□□□□ -0.77
BEST3-209ENST00000548658 OR4A15Q8NGL6 344 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 OR10D3Q8NH80 312 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 OR5AK3PQ8NH89 298 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 RAB3IL1Q8TBN0 382 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 MIPOL1Q8TD10 442 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 MRGPRX4Q96LA9 322 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 RNF145Q96MT1 663 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 SDF2Q99470 211 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 NMUR2Q9GZQ4 415 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 PLSCR4Q9NRQ2 329 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 ICAM5Q9UMF0 924 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 PROCRQ9UNN8 238 aa10.23□□□□□ -0.77
BEST3-209ENST00000548658 RNF103-CHMP3A0A140T963 221 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 TMEM120BA0PK00 339 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 NPIPB9F8W1W9 429 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 C16orf97H3BN30 126 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 HDAC3O15379 428 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 ZNF264O43296 627 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 CGAP01215 116 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 POU2F1P14859 743 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 S100A3P33764 101 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 CTBP2P56545 445 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 CARD18P57730 90 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 SIRPAP78324 504 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 TXNL4AP83876 142 aaKnown RBP10.22□□□□□ -0.77
BEST3-209ENST00000548658 ZNF117Q03924 483 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 FAM27E3Q08E93 113 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 CBFBQ13951 182 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 GUSBP1Q15486 140 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 ARHGAP11BQ3KRB8 267 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 HBMQ6B0K9 141 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 PPP4R4Q6NUP7 873 aa10.22□□□□□ -0.77
BEST3-209ENST00000548658 VWA1Q6PCB0 445 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms