RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 A0A075B6Q4 140 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ANKRD33BA6NCL7 494 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 LRIT2A6NDA9 550 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 SYT5O00445 386 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 GFRA2O00451 464 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 AQP9O43315 295 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PRAMEF2O60811 474 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CDC123O75794 336 aaPredicted RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 CSTAP01040 98 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 GKN3PP0CG01 181 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PET100P0DJ07 73 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 EIF2DP41214 584 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 CASP3P42574 277 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CLDN2P57739 230 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 HTRA3P83110 453 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 TAGLNQ01995 201 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 OR1Q1Q15612 314 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PLK5Q496M5 336 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 LRRC69Q6ZNQ3 347 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 SYT14Q8NB59 555 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 OR52E2Q8NGJ4 325 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 SLC25A36Q96CQ1 311 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 KLHDC7BQ96G42 594 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CLCC1Q96S66 551 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 SPNS1Q9H2V7 528 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 LAMP5Q9UJQ1 280 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 NAALAD2Q9Y3Q0 740 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 TSC2P49815 1807 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 TRBV5-3A0A0A0MS03 114 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 NPIPA5A0A0B4J1W7 369 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GXYLT2A0PJZ3 443 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 NPIPA7E9PJI5 369 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SULT1B1O43704 296 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 HPGDSO60760 199 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 NPIPA8P0DM63 369 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TFPIP10646 304 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RNH1P13489 461 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 UGT2B7P16662 529 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 AHCYP23526 432 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ACVR1BP36896 505 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PDX1P52945 283 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 CEBPGP53567 150 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 YBX1P67809 324 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 CHRNEQ04844 493 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GRK1Q15835 563 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 DUSP7Q16829 419 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ZNF750Q32MQ0 723 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 AGAP6Q5VW22 663 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ABHD17CQ6PCB6 329 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 BCDIN3DQ7Z5W3 292 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 OR5T2Q8NGG2 359 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PIGKQ92643 395 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 C5orf34Q96MH7 638 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 AGAP4Q96P64 663 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TBL1XR1Q9BZK7 514 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 QRSL1Q9H0R6 528 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 RNF121Q9H920 327 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TXNL4BQ9NX01 149 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 PCDHGB2Q9Y5G2 931 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PCDHGA4Q9Y5G9 962 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 IQCMA0A1B0GVH7 501 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 BLACEA4D250 179 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 AGAP14A8MT82 685 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SGK494L7N484 410 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GABRPO00591 440 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 LYRM1O43325 122 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SPARCP09486 303 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 H2AFB2P0C5Z0 115 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GIMD1P0DJR0 217 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 AK4P27144 223 aaPredicted RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 TGFBR1P36897 503 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 NAA10P41227 235 aaPredicted RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 ETV1P50549 477 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GZMMP51124 257 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 EPHA5P54756 1037 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 NRG3P56975 720 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 LTB4RQ15722 352 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TBC1D25Q3MII6 688 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ALG10BQ5I7T1 473 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SLC16A12Q6ZSM3 486 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RBM45Q8IUH3 476 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 LAX1Q8IWV1 398 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ZNF676Q8N7Q3 588 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 OR52R1Q8NGF1 315 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 METTL21AQ8WXB1 218 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 MMABQ96EY8 250 aaPredicted RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 S100A16Q96FQ6 103 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 C7orf34Q96L11 122 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TM9SF2Q99805 663 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PELOQ9BRX2 385 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 TAPBPLQ9BX59 468 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 OR52D1Q9H346 318 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RXFP3Q9NSD7 469 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SIRT5Q9NXA8 310 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TESQ9UGI8 421 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 SCN10AQ9Y5Y9 1956 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 NPIPB8E9PQR5 432 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TNFRSF10AO00220 468 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PIP5K1CO60331 668 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 LDB3O75112 727 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms