RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 FIGNL2A6NMB9 653 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 BBIP1A8MTZ0 92 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 FXYD1O00168 92 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 ETV2O00321 342 aaPredicted RBP17.31■□□□□ 0.36
DDX55-211ENST00000544429 HCRTR2O43614 444 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 EIF4E2O60573 245 aaKnown RBP17.31■□□□□ 0.36
DDX55-211ENST00000544429 LINGO3P0C6S8 592 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 NR2F1P10589 423 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 HK1P19367 917 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 ACVR2AP27037 513 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 PGM1P36871 562 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 LHX2P50458 406 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 P2RX1P51575 399 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 ADORA2A-AS1P86434 159 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 ADRM1Q16186 407 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 PLPPR5Q32ZL2 321 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 PRAMEF8Q5VWM4 474 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 PRAMEF7Q5VXH5 474 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 MTFR2Q6P444 385 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 C3P1Q6ZMU1 363 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 ULK2Q8IYT8 1036 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 RPRMLQ8N4K4 120 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 TOR1AIP2Q8NFQ8 470 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 ZNF524Q96C55 264 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 TREX2Q9BQ50 279 aaPredicted RBP17.31■□□□□ 0.36
DDX55-211ENST00000544429 CCDC106Q9BWC9 280 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 NSRP1Q9H0G5 558 aaKnown RBP17.31■□□□□ 0.36
DDX55-211ENST00000544429 QRSL1Q9H0R6 528 aaKnown RBP17.31■□□□□ 0.36
DDX55-211ENST00000544429 BCL2L10Q9HD36 194 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 CALML5Q9NZT1 146 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 ARMCX1Q9P291 453 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 CARD8Q9Y2G2 431 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 CAPN7Q9Y6W3 813 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 KIAA1549Q9HCM3 1950 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 ICE1Q9Y2F5 2266 aa17.31■□□□□ 0.36
DDX55-211ENST00000544429 OR2M5A3KFT3 312 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 LINC01387J3KSC0 135 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 ZNF264O43296 627 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 CCDC22O60826 627 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 BCAS1O75363 584 aaPredicted RBP17.3■□□□□ 0.36
DDX55-211ENST00000544429 NPPAP01160 153 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 BCHEP06276 602 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 HOXD4P09016 255 aaPredicted RBP17.3■□□□□ 0.36
DDX55-211ENST00000544429 ARAFP10398 606 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 UBL4AP11441 157 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 GABRA1P14867 456 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 ZNF17P17021 662 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 PTGER4P35408 488 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 RNF144AP50876 292 aaPredicted RBP17.3■□□□□ 0.36
DDX55-211ENST00000544429 CRISP3P54108 245 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 PER3P56645 1201 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 CLDN18P56856 261 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 HPCAP84074 193 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 MAPRE2Q15555 327 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 BCL2A1Q16548 175 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 TRMT5Q32P41 509 aaKnown RBP17.3■□□□□ 0.36
DDX55-211ENST00000544429 NDUFAF6Q330K2 333 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 AAGABQ6PD74 315 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 ADGRE4PQ86SQ3 457 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 PM20D2Q8IYS1 436 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 EID3Q8N140 333 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 GTPBP8Q8N3Z3 284 aaPredicted RBP17.3■□□□□ 0.36
DDX55-211ENST00000544429 MAL2Q969L2 176 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 TMEM19Q96HH6 336 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 SH3YL1Q96HL8 342 aaPredicted RBP17.3■□□□□ 0.36
DDX55-211ENST00000544429 PSMG3-AS1Q96PY0 264 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 NPAS1Q99742 590 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 LAT2Q9GZY6 243 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 TMEM38AQ9H6F2 299 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 MED17Q9NVC6 651 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 CORO2BQ9UQ03 480 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 SLC35A3Q9Y2D2 325 aa17.3■□□□□ 0.36
DDX55-211ENST00000544429 RPH3AQ9Y2J0 694 aaPredicted RBP17.3■□□□□ 0.36
DDX55-211ENST00000544429 AHRRA9YTQ3 701 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 ZG16O60844 167 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 NTN1O95631 604 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 ZNF708P17019 499 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 DLX5P56178 289 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 KCNJ10P78508 379 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 NFYCQ13952 458 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 SELPLGQ14242 412 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 GNA13Q14344 377 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 REP15Q6BDI9 236 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 NCCRP1Q6ZVX7 275 aaPredicted RBP17.29■□□□□ 0.36
DDX55-211ENST00000544429 EIF3MQ7L2H7 374 aaKnown RBP17.29■□□□□ 0.36
DDX55-211ENST00000544429 CPLX4Q7Z7G2 160 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 MTDHQ86UE4 582 aaKnown RBP17.29■□□□□ 0.36
DDX55-211ENST00000544429 SNX32Q86XE0 403 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 CMIPQ8IY22 773 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 METTL25Q8N6Q8 603 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 ZNF614Q8N883 585 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 POC1BQ8TC44 478 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 GPR119Q8TDV5 335 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 ITLN2Q8WWU7 325 aaPredicted RBP17.29■□□□□ 0.36
DDX55-211ENST00000544429 ZBTB8AQ96BR9 441 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 SFXN2Q96NB2 322 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 PIGQQ9BRB3 760 aa17.29■□□□□ 0.36
DDX55-211ENST00000544429 KAT8Q9H7Z6 458 aaKnown RBP17.29■□□□□ 0.36
DDX55-211ENST00000544429 EXOSC3Q9NQT5 275 aaKnown RBP17.29■□□□□ 0.36
DDX55-211ENST00000544429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms