RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TMEM185AQ8NFB2 350 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 CPPED1Q9BRF8 314 aaPredicted RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 SLC25A18Q9H1K4 315 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 USP36Q9P275 1121 aaKnown RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 PRSS21Q9Y6M0 314 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 SERPINA5P05154 406 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 CTSAP10619 480 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 GIFP27352 417 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 HNRNPKP61978 463 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNC-212ENST00000542877 GGTA1PQ4G0N0 100 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 EEF1A1P5Q5VTE0 462 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 TMEM244Q5VVB8 128 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 LILRB2Q8N423 598 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 LMF2Q9BU23 707 aaKnown RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 LRFN1Q9P244 771 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 USP3Q9Y6I4 520 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 MYADML2A6NDP7 307 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 BRINP1O60477 761 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 CSF2RAP15509 400 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 SNU13P55769 128 aaKnown RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 ZNF91Q05481 1191 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 CLLU1OSQ5K130 101 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 MKRN2Q9H000 416 aaKnown RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 KLHL13Q9P2N7 655 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 A0A1B0GV50 99 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 CNOT4O95628 575 aaKnown RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 RAB40ALP0C0E4 278 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 GAAP10253 952 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 ARAFP10398 606 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 GABRB3P28472 473 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 BDKRB2P30411 391 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 VIPR2P41587 438 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 TAS2R20P59543 309 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 SELPLGQ14242 412 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 CMTM1Q8IZ96 169 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 RAB40AQ8WXH6 277 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 CDS1Q92903 461 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 KCTD12Q96CX2 325 aaKnown RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 ELP4Q96EB1 424 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 SORBS1Q9BX66 1292 aaKnown RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 ACSS1Q9NUB1 689 aaPredicted RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 DNAJC25-GNG10A0A024R161 153 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 GAPDHSO14556 408 aaPredicted RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 CTDSP2O14595 271 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 P04436 131 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 HBQ1P09105 142 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 RAC2P15153 192 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 GIPRP48546 466 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 CAV2P51636 162 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 IRF4Q15306 451 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 C12orf45Q8N5I9 185 aaPredicted RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 OR1J4Q8NGS1 313 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 NAA50Q9GZZ1 169 aaKnown RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 PPA2Q9H2U2 334 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 A0A0U1RQS6 177 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 TTLL8A6PVC2 850 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 MAN2B1O00754 1011 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 LATO43561 262 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 RPL35P42766 123 aaKnown RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 ZNF542PQ5EBM4 170 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 ZNF695Q8IW36 515 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 ACBD4Q8NC06 268 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 MYLIPQ8WY64 445 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 DTD2Q96FN9 168 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 C8orf33Q9H7E9 229 aaPredicted RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 OR6C2Q9NZP2 312 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 NPAP1Q9NZP6 1156 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 SLAMF8Q9P0V8 285 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 B3GALT1Q9Y5Z6 326 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 ATXN1LP0C7T5 689 aaKnown RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 HNRNPA2B1P22626 353 aaKnown RBP12.32□□□□□ -0.44
TNC-212ENST00000542877 PSMB10P40306 273 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 ALDH3B1P43353 468 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 ENTPD8Q5MY95 495 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 PRAMEF8Q5VWM4 474 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 PRAMEF7Q5VXH5 474 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 RETREG3Q86VR2 466 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 LSMEM2Q8N112 164 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 OR13F1Q8NGS4 319 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 TOMM40LQ969M1 308 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 EGLN2Q96KS0 407 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 ACTR10Q9NZ32 417 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 KLK4Q9Y5K2 254 aa12.32□□□□□ -0.44
TNC-212ENST00000542877 SEC14L2O76054 403 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 PROS1P07225 676 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 POU4F3Q15319 338 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 BCL2A1Q16548 175 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 FNDC9Q8TBE3 224 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 TM9SF4Q92544 642 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 YARS2Q9Y2Z4 477 aaKnown RBP12.31□□□□□ -0.44
TNC-212ENST00000542877 ZNF337Q9Y3M9 751 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 A0A0J9YY10 115 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 P2RX6O15547 441 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 MT-ND4P03905 459 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 TAS2R19P59542 299 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 ERVK-25P63136 954 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 PSPHP78330 225 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 SMN1Q16637 294 aaKnown RBP12.31□□□□□ -0.44
TNC-212ENST00000542877 ZNF534Q76KX8 674 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms