RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 ACTRT2Q8TDY3 377 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 MS4A4EQ96PG1 132 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 REG4Q9BYZ8 158 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 TXLNGYQ9BZA5 131 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 TSPYL1Q9H0U9 437 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 C3orf14Q9HBI5 128 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 GIN1Q9NXP7 522 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 GIMAP2Q9UG22 337 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 LIPT1Q9Y234 373 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 FIS1Q9Y3D6 152 aa13.74□□□□□ -0.21
CLSTN3-213ENST00000541953 CCDC151A5D8V7 595 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 DPRXA6NFQ7 191 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 TMEM233B4DJY2 109 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 ZNF814B7Z6K7 855 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 RAMP1O60894 148 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 CD8AP01732 235 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 MYL2P10916 166 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 ENPP1P22413 925 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 PRPH2P23942 346 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 ZNF41P51814 821 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 MANFP55145 182 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 BSPH1Q075Z2 132 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 FAPQ12884 760 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 RFTN2Q52LD8 501 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 SFRP5Q5T4F7 317 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 TRABD2AQ86V40 505 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 PHC2Q8IXK0 858 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 GSPT2Q8IYD1 628 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 B4GALNT2Q8NHY0 566 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 FBXO27Q8NI29 283 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 CDS1Q92903 461 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 FBXW5Q969U6 566 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 FAM120BQ96EK7 910 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 OR10A4Q9H209 315 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 SLCO5A1Q9H2Y9 848 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 REEP4Q9H6H4 257 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 CXorf36Q9H7Y0 433 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 LRTM1Q9HBL6 345 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 KLHL13Q9P2N7 655 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 PSMC3IPQ9P2W1 217 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 PRSS50Q9UI38 385 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 KCNE3Q9Y6H6 103 aa13.73□□□□□ -0.21
CLSTN3-213ENST00000541953 C9JVG2 144 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 PLIN3O60664 434 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ADAM11O75078 769 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ADAP00813 363 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 GSTA1P08263 222 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 CARD18P57730 90 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 RPL38P63173 70 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ZNF672Q499Z4 452 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 HEPHL1Q6MZM0 1159 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 COX18Q8N8Q8 333 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 BANPQ8N9N5 519 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ATP6V1C2Q8NEY4 427 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 STEAP2Q8NFT2 490 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ACMSDQ8TDX5 336 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 SMAP2Q8WU79 429 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 JADE3Q92613 823 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ZNF775Q96BV0 537 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 PPCDCQ96CD2 204 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ZNF764Q96H86 408 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 CCT7Q99832 543 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 TACO1Q9BSH4 297 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 TRIM2Q9C040 744 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ANKZF1Q9H8Y5 726 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 RRAGDQ9NQL2 400 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 UBQLN4Q9NRR5 601 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 GLRX2Q9NS18 164 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 C1orf109Q9NX04 203 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 PAQR5Q9NXK6 330 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 NPAP1Q9NZP6 1156 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 SH3BP4Q9P0V3 963 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 CARD8Q9Y2G2 431 aa13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 WBP11Q9Y2W2 641 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-213ENST00000541953 ALPK2Q86TB3 2170 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 A0A096LNT2 108 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 A0A1W2PNR3 127 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 A0A1W2PQD3 144 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 TTC36A6NLP5 189 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 GPRIN2O60269 458 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 TBX19O60806 448 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 CRCPO75575 148 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 LYZL6O75951 148 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 SHBGP04278 402 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 HMGN2P05204 90 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 CD3EP07766 207 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 UROSP10746 265 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 LASP1Q14847 261 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 VPS26BQ4G0F5 336 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 FCRLAQ7L513 359 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 OLIG3Q7RTU3 272 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 STK32CQ86UX6 486 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 OR6Y1Q8NGX8 325 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 CEP70Q8NHQ1 597 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 PHOSPHO1Q8TCT1 267 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 TRAF4Q9BUZ4 470 aaPredicted RBP13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 OXSMQ9NWU1 459 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 ICAM5Q9UMF0 924 aa13.71□□□□□ -0.21
CLSTN3-213ENST00000541953 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
CLSTN3-213ENST00000541953 CENPVL1A0A0U1RR11 272 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms