RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 FAM153BP0C7A2 387 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 ACP2P11117 423 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 SDC1P18827 310 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 HPCAL1P37235 193 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 P2RY6Q15077 328 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 DUSP5Q16690 384 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 LSM12Q3MHD2 195 aaKnown RBP13.34□□□□□ -0.27
ITM2C-208ENST00000541852 FAM153CQ494X1 144 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 CLEC6AQ6EIG7 209 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 CIARTQ8N365 385 aaPredicted RBP13.34□□□□□ -0.27
ITM2C-208ENST00000541852 TRMT61AQ96FX7 289 aaKnown RBP13.34□□□□□ -0.27
ITM2C-208ENST00000541852 PLPPR2Q96GM1 343 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 PRPF18Q99633 342 aaKnown RBP13.34□□□□□ -0.27
ITM2C-208ENST00000541852 ATAD3AQ9NVI7 634 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 CLEC4AQ9UMR7 237 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 ACTL7BQ9Y614 415 aa13.34□□□□□ -0.27
ITM2C-208ENST00000541852 RAI1Q7Z5J4 1906 aaPredicted RBP13.33□□□□□ -0.28
ITM2C-208ENST00000541852 LSM1O15116 133 aaKnown RBP13.33□□□□□ -0.28
ITM2C-208ENST00000541852 LYPLA1O75608 230 aaPredicted RBP13.33□□□□□ -0.28
ITM2C-208ENST00000541852 LINGO3P0C6S8 592 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 LINC00032P0C843 101 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 KRT4P19013 534 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 AGTR1P30556 359 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 P2RX1P51575 399 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 ATP5J2P56134 94 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 ZNF385BQ569K4 471 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 ANKRD26P1Q6NSI1 321 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 BHLHB9Q6PI77 547 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 WFDC8Q8IUA0 241 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 GATSQ8NAP1 163 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 PHOSPHO1Q8TCT1 267 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 ADAMTS15Q8TE58 950 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.33□□□□□ -0.28
ITM2C-208ENST00000541852 OR5P2Q8WZ92 322 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 JADE3Q92613 823 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 MOAP1Q96BY2 351 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 SH3YL1Q96HL8 342 aaPredicted RBP13.33□□□□□ -0.28
ITM2C-208ENST00000541852 PPP3R2Q96LZ3 170 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 ACTRT3Q9BYD9 372 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 ESRP2Q9H6T0 727 aaKnown RBP13.33□□□□□ -0.28
ITM2C-208ENST00000541852 TNFRSF12AQ9NP84 129 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 ZCCHC3Q9NUD5 404 aaKnown RBP13.33□□□□□ -0.28
ITM2C-208ENST00000541852 BAIAP2L1Q9UHR4 511 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 ATP6V1HQ9UI12 483 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 FAF1Q9UNN5 650 aaPredicted RBP13.33□□□□□ -0.28
ITM2C-208ENST00000541852 TRAF6Q9Y4K3 522 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 DNAJC15Q9Y5T4 150 aa13.33□□□□□ -0.28
ITM2C-208ENST00000541852 USF3Q68DE3 2245 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 GTPBP1O00178 669 aaKnown RBP13.32□□□□□ -0.28
ITM2C-208ENST00000541852 ZNF195O14628 629 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 NPHS1O60500 1241 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 NUDT14O95848 222 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 OPN1LWP04000 364 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 HMGN2P05204 90 aaKnown RBP13.32□□□□□ -0.28
ITM2C-208ENST00000541852 YES1P07947 543 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 BCKDHAP12694 445 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 IL32P24001 234 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 RPL38P63173 70 aaKnown RBP13.32□□□□□ -0.28
ITM2C-208ENST00000541852 TP53BP2Q13625 1128 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 KLHL26Q53HC5 615 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 EXOSC6Q5RKV6 272 aaKnown RBP13.32□□□□□ -0.28
ITM2C-208ENST00000541852 SFRP5Q5T4F7 317 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 KANK2Q63ZY3 851 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 CDC73Q6P1J9 531 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 DNAJC14Q6Y2X3 702 aaPredicted RBP13.32□□□□□ -0.28
ITM2C-208ENST00000541852 C10orf107Q8IVU9 208 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 OR56A1Q8NGH5 318 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 PSMA8Q8TAA3 256 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 POC1BQ8TC44 478 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 RNF128Q8TEB7 428 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 FAM120BQ96EK7 910 aaKnown RBP13.32□□□□□ -0.28
ITM2C-208ENST00000541852 CHMP6Q96FZ7 201 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 C16orf58Q96GQ5 468 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 MRGPRX4Q96LA9 322 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 RHOXF2Q9BQY4 288 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 FBXO34Q9NWN3 711 aa13.32□□□□□ -0.28
ITM2C-208ENST00000541852 ZANQ9Y493 2812 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 TRIM64A6NGJ6 449 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 TRIM64BA6NI03 449 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 DUXAA6NLW8 204 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 CD3EP07766 207 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 PCSK6P29122 969 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 SFTPDP35247 375 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 IDUAP35475 653 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 CCT3P49368 545 aaKnown RBP13.31□□□□□ -0.28
ITM2C-208ENST00000541852 ATP12AP54707 1039 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 RAC3P60763 192 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 RPS4XP62701 263 aaKnown RBP13.31□□□□□ -0.28
ITM2C-208ENST00000541852 LASP1Q14847 261 aaKnown RBP13.31□□□□□ -0.28
ITM2C-208ENST00000541852 ZNF239Q16600 458 aaKnown RBP13.31□□□□□ -0.28
ITM2C-208ENST00000541852 GALNTL6Q49A17 601 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 DDIASQ8IXT1 998 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 GABRG1Q8N1C3 465 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 OR2T11Q8NH01 316 aa13.31□□□□□ -0.28
ITM2C-208ENST00000541852 UBLCP1Q8WVY7 318 aaPredicted RBP13.31□□□□□ -0.28
ITM2C-208ENST00000541852 AKAP1Q92667 903 aaKnown RBP eCLIP13.31□□□□□ -0.28
ITM2C-208ENST00000541852 KISS1RQ969F8 398 aaPredicted RBP13.31□□□□□ -0.28
ITM2C-208ENST00000541852 GTPBP3Q969Y2 492 aaKnown RBP13.31□□□□□ -0.28
ITM2C-208ENST00000541852 GATA5Q9BWX5 397 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms