RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 RPL4P36578 427 aaKnown RBP2.97□□□□□ -1.93
RAP1B-224ENST00000541216 P2RY4P51582 365 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 PLOD1Q02809 727 aaPredicted RBP2.97□□□□□ -1.93
RAP1B-224ENST00000541216 WASHC5Q12768 1159 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 RAB12Q6IQ22 244 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 Q7L0L9 218 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 VPS36Q86VN1 386 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 MCOLN2Q8IZK6 566 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 KDM8Q8N371 416 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 MRPL43Q8N983 215 aaKnown RBP2.97□□□□□ -1.93
RAP1B-224ENST00000541216 FAM71CQ8NEG0 241 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 FRAT1Q92837 279 aaPredicted RBP2.97□□□□□ -1.93
RAP1B-224ENST00000541216 TBC1D10AQ9BXI6 508 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 KAT8Q9H7Z6 458 aaKnown RBP2.97□□□□□ -1.93
RAP1B-224ENST00000541216 PNO1Q9NRX1 252 aaKnown RBP2.97□□□□□ -1.93
RAP1B-224ENST00000541216 GALPQ9UBC7 116 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 SPTBN5Q9NRC6 3674 aaKnown RBP2.97□□□□□ -1.93
RAP1B-224ENST00000541216 DUOX2Q9NRD8 1548 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 PLEKHG2Q9H7P9 1386 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 RGPD3A6NKT7 1758 aaPredicted RBP2.97□□□□□ -1.93
RAP1B-224ENST00000541216 RGPD4Q7Z3J3 1758 aa2.97□□□□□ -1.93
RAP1B-224ENST00000541216 ABCA3Q99758 1704 aa2.96□□□□□ -1.93
RAP1B-224ENST00000541216 TNS3Q68CZ2 1445 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 ZSCAN5BA6NJL1 495 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 PDXKO00764 312 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 TGFAP01135 160 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 CCDC192P0DO97 292 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 XRCC1P18887 633 aaPredicted RBP2.96□□□□□ -1.94
RAP1B-224ENST00000541216 FUT1P19526 365 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 LIM2P55344 173 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 STX17P56962 302 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 SLC26A5P58743 744 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 MAP2K1Q02750 393 aaPredicted RBP2.96□□□□□ -1.94
RAP1B-224ENST00000541216 DPYSQ14117 519 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 TMEM184AQ6ZMB5 413 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 SLC34A3Q8N130 599 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 BPIFB2Q8N4F0 458 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 TMEM80Q96HE8 168 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 TMEM121Q9BTD3 319 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 ISG20L2Q9H9L3 353 aaKnown RBP2.96□□□□□ -1.94
RAP1B-224ENST00000541216 SOHLH2Q9NX45 425 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.96□□□□□ -1.94
RAP1B-224ENST00000541216 NINJ2Q9NZG7 142 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 MOSPD1Q9UJG1 213 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 PDE10AQ9Y233 779 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 USP16Q9Y5T5 823 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 MTUS2Q5JR59 1369 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 KIF15Q9NS87 1388 aa2.96□□□□□ -1.94
RAP1B-224ENST00000541216 XRN1Q8IZH2 1706 aaKnown RBP2.96□□□□□ -1.94
RAP1B-224ENST00000541216 TRIOBPQ9H2D6 2365 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 PHRF1Q9P1Y6 1649 aaKnown RBP2.95□□□□□ -1.94
RAP1B-224ENST00000541216 ZNF254O75437 659 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 SCRG1O75711 98 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 STMN1P16949 149 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 NF2P35240 595 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 DRD3P35462 400 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 RABIFP47224 123 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 EMDP50402 254 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 ATXN3P54252 364 aaPredicted RBP2.95□□□□□ -1.94
RAP1B-224ENST00000541216 ZNF154Q13106 437 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 KCNJ11Q14654 390 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 SLX4IPQ5VYV7 408 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 CXCL17Q6UXB2 119 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 C14orf178Q8N769 122 aaPredicted RBP2.95□□□□□ -1.94
RAP1B-224ENST00000541216 OR9A4Q8NGU2 314 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 C14orf79Q96F83 325 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 ROPN1Q9HAT0 212 aaPredicted RBP2.95□□□□□ -1.94
RAP1B-224ENST00000541216 EIF3LQ9Y262 564 aaKnown RBP2.95□□□□□ -1.94
RAP1B-224ENST00000541216 LRRIQ1Q96JM4 1722 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 PIEZO1Q92508 2521 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 LRPPRCP42704 1394 aaKnown RBP2.95□□□□□ -1.94
RAP1B-224ENST00000541216 PRXQ9BXM0 1461 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 VCANP13611 3396 aa2.95□□□□□ -1.94
RAP1B-224ENST00000541216 CCDC144AA2RUR9 1427 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 ARHGAP31Q2M1Z3 1444 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 PAPPAQ13219 1627 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 TTC28Q96AY4 2481 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 FAM231BA6NCW3 169 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 SAGE2PA6NJ88 616 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 LRRC30A6NM36 301 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 LGALS8O00214 317 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 OR7A17O14581 309 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 SSX5O60225 188 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 SEC22BO75396 215 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 APBB3O95704 486 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 PGK1P00558 417 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 CD55P08174 381 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 CCDC166P0CW27 439 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 PSMB1P20618 241 aaKnown RBP2.94□□□□□ -1.94
RAP1B-224ENST00000541216 RPA1P27694 616 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 STARP49675 285 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 DIO3P55073 304 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 RPL32P62910 135 aaKnown RBP2.94□□□□□ -1.94
RAP1B-224ENST00000541216 RPL8P62917 257 aaKnown RBP2.94□□□□□ -1.94
RAP1B-224ENST00000541216 OVGP1Q12889 678 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 EXOSC2Q13868 293 aaKnown RBP2.94□□□□□ -1.94
RAP1B-224ENST00000541216 KARSQ15046 597 aaKnown RBP2.94□□□□□ -1.94
RAP1B-224ENST00000541216 C2orf83Q53S99 150 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 OR2B11Q5JQS5 317 aa2.94□□□□□ -1.94
RAP1B-224ENST00000541216 LDLRAP1Q5SW96 308 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms