RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 UFSP1Q6NVU6 142 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 NEK5Q6P3R8 708 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 TFAP2EQ6VUC0 442 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 TGIF2LYQ8IUE0 185 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 LRRC17Q8N6Y2 441 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 CCDC110Q8TBZ0 833 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 C16orf45Q96MC5 204 aaPredicted RBP3.98□□□□□ -1.77
YBX3-210ENST00000540975 CATSPER2Q96P56 530 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 MTMR9Q96QG7 549 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 RUFY1Q96T51 708 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 THUMPD2Q9BTF0 503 aaKnown RBP3.98□□□□□ -1.77
YBX3-210ENST00000540975 HES7Q9BYE0 225 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 FKBP14Q9NWM8 211 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 FZR1Q9UM11 496 aa3.98□□□□□ -1.77
YBX3-210ENST00000540975 TDRKHQ9Y2W6 561 aaKnown RBP3.98□□□□□ -1.77
YBX3-210ENST00000540975 POLA1P09884 1462 aaPredicted RBP3.98□□□□□ -1.77
YBX3-210ENST00000540975 MAP3K19Q56UN5 1328 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 MYO3BQ8WXR4 1341 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 KIF21AQ7Z4S6 1674 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 LRRK1Q38SD2 2015 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 ARHGEF11O15085 1522 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 ZNF608Q9ULD9 1512 aaPredicted RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 PTPN23Q9H3S7 1636 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 TRAV6A0A075B6T7 132 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 H3BMH7 237 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 WWP2O00308 870 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 NDUFAB1O14561 156 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 HSF2BPO75031 334 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 SLITRK3O94933 977 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 PROS1P07225 676 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 DNAJB1P25685 340 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 PTBP1P26599 531 aaKnown RBP eCLIP3.97□□□□□ -1.77
YBX3-210ENST00000540975 HAAOP46952 286 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 SLC6A8P48029 635 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 IL9RQ01113 521 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 GFPT1Q06210 699 aaPredicted RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 RPA4Q13156 261 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 CARTPTQ16568 116 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 ZSWIM7Q19AV6 140 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 PARP6Q2NL67 630 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 BEND6Q5SZJ8 279 aaPredicted RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 FAM173BQ6P4H8 233 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 NCCRP1Q6ZVX7 275 aaPredicted RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 GRAMD2AQ8IUY3 354 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 CSNK1A1LQ8N752 337 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 ZBTB44Q8NCP5 570 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 TMEM185AQ8NFB2 350 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 FAM81AQ8TBF8 368 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 RNF139Q8WU17 664 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 KRT35Q92764 455 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 C18orf25Q96B23 403 aaPredicted RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 PPP1R14BQ96C90 147 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 ZNF799Q96GE5 643 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 VPS39Q96JC1 886 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 TTC25Q96NG3 672 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 COQ7Q99807 217 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 RIOK1Q9BRS2 568 aaKnown RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 Q9H3A6 140 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 C8orf33Q9H7E9 229 aaPredicted RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 PRMT8Q9NR22 394 aaPredicted RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 TRIM10Q9UDY6 481 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 TIMM22Q9Y584 194 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 METP08581 1390 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 DENND4BO75064 1496 aaPredicted RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 SNAPC4Q5SXM2 1469 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 TEX14Q8IWB6 1497 aa3.97□□□□□ -1.77
YBX3-210ENST00000540975 PCF11O94913 1555 aaKnown RBP3.97□□□□□ -1.77
YBX3-210ENST00000540975 MAPK8IP3Q9UPT6 1336 aa3.96□□□□□ -1.77
YBX3-210ENST00000540975 PDS5BQ9NTI5 1447 aa3.96□□□□□ -1.77
YBX3-210ENST00000540975 EPRSP07814 1512 aaKnown RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 BCORL1Q5H9F3 1711 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 A0A0U1RRA0 63 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 GOLGA6L4A6NEF3 574 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 RSPH10B2B2RC85 870 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 IMPA2O14732 288 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 MAPK13O15264 365 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 YKT6O15498 198 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 EMC8O43402 210 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 VEGFDO43915 354 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 OPN1MWP04001 364 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 PGK2P07205 417 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 HOXC4P09017 264 aaPredicted RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 RSPH10BP0C881 870 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 OPN1MW2P0DN77 364 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 OPN1MW3P0DN78 364 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 TROVE2P10155 538 aaKnown RBP eCLIP3.96□□□□□ -1.78
YBX3-210ENST00000540975 EPB41P11171 864 aaKnown RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 ARF4P18085 180 aaPredicted RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 CDH5P33151 784 aaPredicted RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 MAGEA4P43358 317 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 IFNAR2P48551 515 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 SLC26A5P58743 744 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 SRP54P61011 504 aaKnown RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 ARF5P84085 180 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 ACTN3Q08043 901 aaPredicted RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 AGKQ53H12 422 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 CELF3Q5SZQ8 465 aaKnown RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 SPATA46Q5T0L3 261 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 THOC7Q6I9Y2 204 aaKnown RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 TRPM8Q7Z2W7 1104 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms