RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 DSPPQ9NZW4 1301 aa14.09□□□□□ -0.15
DDB1-218ENST00000540784 SMG1Q96Q15 3661 aaKnown RBP14.09□□□□□ -0.15
DDB1-218ENST00000540784 A0A087WZY1 265 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 B4DXG7 233 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 FAM47E-STBD1D6RA91 191 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 OIP5O43482 229 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 SERPINB7O75635 380 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 NUDT14O95848 222 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 UBTFL6P0CB48 400 aaPredicted RBP14.08□□□□□ -0.16
DDB1-218ENST00000540784 RPS4Y1P22090 263 aaKnown RBP14.08□□□□□ -0.16
DDB1-218ENST00000540784 GNLYP22749 145 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 PTGS2P35354 604 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 PGM1P36871 562 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 P2RX1P51575 399 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 MXRA7P84157 204 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 ZNF117Q03924 483 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 MRPL49Q13405 166 aaKnown RBP14.08□□□□□ -0.16
DDB1-218ENST00000540784 GANABQ14697 944 aaKnown RBP14.08□□□□□ -0.16
DDB1-218ENST00000540784 ZSWIM7Q19AV6 140 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 VMACQ2NL98 169 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 NDUFAF6Q330K2 333 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 GLYR1Q49A26 553 aaPredicted RBP14.08□□□□□ -0.16
DDB1-218ENST00000540784 ZNF311Q5JNZ3 666 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 C8orf82Q6P1X6 216 aaPredicted RBP14.08□□□□□ -0.16
DDB1-218ENST00000540784 ERICH5Q6P6B1 374 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 CBLN3Q6UW01 205 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 VRK2Q86Y07 508 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 TOR1AIP2Q8NFQ8 470 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 NEIL3Q8TAT5 605 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 REXO5Q96IC2 774 aaKnown RBP14.08□□□□□ -0.16
DDB1-218ENST00000540784 OR2B2Q9GZK3 357 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 SLC6A15Q9H2J7 730 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 CMTM6Q9NX76 183 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 ICAM5Q9UMF0 924 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 LIPGQ9Y5X9 500 aa14.08□□□□□ -0.16
DDB1-218ENST00000540784 PRRC2CQ9Y520 2896 aaKnown RBP14.07□□□□□ -0.16
DDB1-218ENST00000540784 CCT8L1PA6NM43 557 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 CLDN24A6NM45 220 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 B2RBV5 119 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 J3QKU1 62 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 AQP7O14520 342 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 THBS1P07996 1170 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 NID1P14543 1247 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 PLA2G2AP14555 144 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 TCEA1P23193 301 aaKnown RBP14.07□□□□□ -0.16
DDB1-218ENST00000540784 AQP1P29972 269 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 ZNF41P51814 821 aaPredicted RBP14.07□□□□□ -0.16
DDB1-218ENST00000540784 SLC7A2P52569 658 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 SUMO3P55854 103 aaPredicted RBP14.07□□□□□ -0.16
DDB1-218ENST00000540784 LIPEQ05469 1076 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.07□□□□□ -0.16
DDB1-218ENST00000540784 LIN52Q52LA3 116 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 INTS11Q5TA45 600 aaKnown RBP14.07□□□□□ -0.16
DDB1-218ENST00000540784 ARSKQ6UWY0 536 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 IFNEQ86WN2 208 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 SPPL2CQ8IUH8 684 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 TMCO5AQ8N6Q1 288 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 OR5W2Q8NH69 310 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 SARAFQ96BY9 339 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 NDE1Q9NXR1 346 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 ADA2Q9NZK5 511 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 ZNF443Q9Y2A4 671 aaPredicted RBP14.07□□□□□ -0.16
DDB1-218ENST00000540784 RPH3AQ9Y2J0 694 aaPredicted RBP14.07□□□□□ -0.16
DDB1-218ENST00000540784 SLC6A5Q9Y345 797 aa14.07□□□□□ -0.16
DDB1-218ENST00000540784 OR14I1A6ND48 311 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 PRORSD1PA6NEY8 169 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 NPIPA2E9PIF3 369 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 NPIPA3F8WFD2 350 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 M0QX08 132 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 ZNHIT1O43257 154 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 PABPC4LP0CB38 370 aaKnown RBP14.06□□□□□ -0.16
DDB1-218ENST00000540784 ABOP16442 354 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 CALB2P22676 271 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 PCGF2P35227 344 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 CCR4P51679 360 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 SLC25A3Q00325 362 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 CBFBQ13951 182 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 VEZF1Q14119 521 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 EIF2S3LQ2VIR3 472 aaKnown RBP14.06□□□□□ -0.16
DDB1-218ENST00000540784 AAGABQ6PD74 315 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 C16orf89Q6UX73 402 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 FGD2Q7Z6J4 655 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 PATL1Q86TB9 770 aaKnown RBP14.06□□□□□ -0.16
DDB1-218ENST00000540784 OR2T12Q8NG77 320 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 PRR7Q8TB68 274 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 GPR119Q8TDV5 335 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 CNOT9Q92600 299 aaKnown RBP14.06□□□□□ -0.16
DDB1-218ENST00000540784 ABTB1Q969K4 478 aaPredicted RBP14.06□□□□□ -0.16
DDB1-218ENST00000540784 ARSGQ96EG1 525 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 SPAG4Q9NPE6 437 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 MED17Q9NVC6 651 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 ACAD8Q9UKU7 415 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 OSGIN2Q9Y236 505 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 VDAC3Q9Y277 283 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 ZNF835Q9Y2P0 537 aa14.06□□□□□ -0.16
DDB1-218ENST00000540784 GPC6Q9Y625 555 aaPredicted RBP14.06□□□□□ -0.16
DDB1-218ENST00000540784 ELOVL7A1L3X0 281 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 CDHR4A6H8M9 788 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 FAM220BPB1ANY3 271 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 PYCARD-AS1I3L0S3 204 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms