RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PCBD2Q9H0N5 130 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GKN1Q9NS71 199 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 MYEF2Q9P2K5 600 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PCDHGC4Q9Y5F7 938 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 MYLKQ15746 1914 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ZNF106Q9H2Y7 1883 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GGT3PA6NGU5 568 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ACOT7O00154 380 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SCAMP3O14828 347 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CLDN9O95484 217 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 OPN1SWP03999 348 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 RAF1P04049 648 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ZNF26P17031 533 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ENPP1P22413 925 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TGM1P22735 817 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TLX1P31314 330 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GGT2P36268 569 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 B2MP61769 119 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CBFBQ13951 182 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CTSL3PQ5NE16 218 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CES5AQ6NT32 575 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TMEM207Q6UWW9 146 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ZNF627Q7L945 461 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SLC16A9Q7RTY1 509 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 LDB1Q86U70 411 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TMEM102Q8N9M5 508 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 RNF141Q8WVD5 230 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 DPF1Q92782 380 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PDXPQ96GD0 296 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CHRDQ9H2X0 955 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 KCNJ16Q9NPI9 418 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SLCO3A1Q9UIG8 710 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TIMM8BQ9Y5J9 83 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TMEM14AQ9Y6G1 99 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CDHR4A6H8M9 788 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GPRIN2O60269 458 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 STK16O75716 305 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 KCNK2O95069 426 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 G6PDP11413 515 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GALP22466 123 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GIFP27352 417 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TGFBR1P36897 503 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 BUD31P41223 144 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SOX3P41225 446 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 RGRP47804 291 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 MAP2K6P52564 334 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 NPRL3Q12980 569 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GPR50Q13585 617 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 C18orf63Q68DL7 685 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 LETMD1Q6P1Q0 360 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ZNF765Q7L2R6 523 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TMEM150AQ86TG1 271 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ADPRHL1Q8NDY3 354 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 STT3BQ8TCJ2 826 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PPCDCQ96CD2 204 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ZNF845Q96IR2 970 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 RAD9AQ99638 391 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SPIN2AQ99865 258 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SPIN2BQ9BPZ2 258 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 MED17Q9NVC6 651 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 A0A1B0GV90 55 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TMEM72A0PK05 275 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 OR51F1A6NGY5 319 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 METTL15A6NJ78 407 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ANXA2P2A6NMY6 339 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 EEF1E1-BLOC1S5C9J1V9 151 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 F5H5P2 479 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 DFFBO76075 338 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 OR2F2O95006 317 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PTBP3O95758 552 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ANXA2P07355 339 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 BCKDHAP12694 445 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PRPH2P23942 346 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TAS2R50P59544 299 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 C1QTNF8P60827 252 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 LMAN2Q12907 356 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 OR2F1Q13607 317 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TMEM31Q5JXX7 168 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 HENMT1Q5T8I9 393 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SMARCD3Q6STE5 483 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ENPP6Q6UWR7 440 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 RNF44Q7L0R7 432 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PIM3Q86V86 326 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PTRH1Q86Y79 214 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 KCNRGQ8N5I3 272 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TANKQ92844 425 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TMEM159Q96B96 161 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CMSS1Q9BQ75 279 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 C20orf24Q9BUV8 137 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 MS4A7Q9GZW8 240 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 NEUROD4Q9HD90 331 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 IGLV3-16A0A075B6K0 115 aa5.69□□□□□ -1.5
PTPRD-214ENST00000540109 ELOA3CA0A087WX78 387 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-214ENST00000540109 GXYLT2A0PJZ3 443 aa5.69□□□□□ -1.5
PTPRD-214ENST00000540109 ACOT8O14734 319 aa5.69□□□□□ -1.5
PTPRD-214ENST00000540109 YY2O15391 372 aa5.69□□□□□ -1.5
PTPRD-214ENST00000540109 FFAR2O15552 330 aa5.69□□□□□ -1.5
PTPRD-214ENST00000540109 RNF13O43567 381 aa5.69□□□□□ -1.5
PTPRD-214ENST00000540109 TLX2O43763 284 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-214ENST00000540109 POP7O75817 140 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms