RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 EFHD2Q96C19 240 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-210ENST00000539599 MRPS18AQ9NVS2 196 aaKnown RBP13.06□□□□□ -0.32
UBE3B-210ENST00000539599 PTGFRNQ9P2B2 879 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 GSTK1Q9Y2Q3 226 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 NOX1Q9Y5S8 564 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 A0A1W2PQF6 199 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 FAM25AB3EWG3 89 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 FAM25CB3EWG5 89 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 FAM25GB3EWG6 89 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 HRKO00198 91 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 EGFP01133 1207 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 SLC35G6P0C7Q6 338 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 TEAD1P28347 426 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 IFNGR2P38484 337 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 EEF1A1P68104 462 aaKnown RBP13.06□□□□□ -0.32
UBE3B-210ENST00000539599 OR1Q1Q15612 314 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 DECR1Q16698 335 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 NDUFAF6Q330K2 333 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 SSX6Q7RTT6 188 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 PEX5LQ8IYB4 626 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 FAM181AQ8N9Y4 354 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 IL17RCQ8NAC3 791 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 ENKURQ8TC29 256 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 FAM3CQ92520 227 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 OSTF1Q92882 214 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 GAL3ST3Q96A11 431 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 UPRTQ96BW1 309 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 ORAI1Q96D31 301 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 IL21RQ9HBE5 538 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 H2AFY2Q9P0M6 372 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-210ENST00000539599 KLF15Q9UIH9 416 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 DAPP1Q9UN19 280 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 CDH10Q9Y6N8 788 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 SAGP10523 405 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-210ENST00000539599 TFPIP10646 304 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 ELK1P19419 428 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 ABATP80404 500 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 ASAH1Q13510 395 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 CEBPEQ15744 281 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 DCST2Q5T1A1 773 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 ANKRD54Q6NXT1 300 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 SYCE2Q6PIF2 218 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 PTP4A1Q93096 173 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 BMFQ96LC9 184 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 TMEM246Q9BRR3 403 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 ALG8Q9BVK2 526 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 RAB11FIP5Q9BXF6 653 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 KIR3DX1Q9H7L2 352 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 SIDT1Q9NXL6 827 aaKnown RBP13.05□□□□□ -0.32
UBE3B-210ENST00000539599 CLDND1Q9NY35 253 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 SGK494L7N484 410 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 KLF8O95600 359 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-210ENST00000539599 HOXB2P14652 356 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 HTR1FP30939 366 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 RGS1Q08116 209 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 DSG2Q14126 1118 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 TATDN3Q17R31 274 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 CD200R1LQ6Q8B3 271 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 KIAA1324Q6UXG2 1013 aaKnown RBP13.05□□□□□ -0.32
UBE3B-210ENST00000539599 OR2L13Q8N349 312 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 SETD6Q8TBK2 473 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 SLC7A6Q92536 515 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 PEX11GQ96HA9 241 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 RIPOR3Q96MK2 946 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 IFT27Q9BW83 186 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 FN3KQ9H479 309 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 RNF121Q9H920 327 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 MEPEQ9NQ76 525 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-210ENST00000539599 GDE1Q9NZC3 331 aa13.05□□□□□ -0.32
UBE3B-210ENST00000539599 TRDV1A0A1B0GX56 115 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 GABRA3P34903 492 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 STAT5AP42229 794 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 SNRPD2P62316 118 aaKnown RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 SNAP47Q5SQN1 464 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 TRIQKQ629K1 86 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 NIPAL3Q6P499 406 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 VWA5B2Q8N398 1253 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 LINC00471Q8N535 108 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 COX18Q8N8Q8 333 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 CNOT9Q92600 299 aaKnown RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 RELTQ969Z4 430 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 COLEC10Q9Y6Z7 277 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 CENPXA8MT69 81 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 FAM47E-STBD1D6RA91 191 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 H0YGG7 62 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 GTPBP1O00178 669 aaKnown RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 PPP1R3DO95685 299 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 NGFRP08138 427 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ARF3P61204 181 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 DLX2Q07687 328 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ENPP2Q13822 863 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 FAM53BQ14153 422 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ERV3-1Q14264 604 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF57Q68EA5 555 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms