RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TEKT2Q9UIF3 430 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 FAM32AQ9Y421 112 aaKnown RBP12.97□□□□□ -0.33
CD4-208ENST00000538827 TESMINQ9Y4I5 508 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 ENPP4Q9Y6X5 453 aa12.97□□□□□ -0.33
CD4-208ENST00000538827 CDHR4A6H8M9 788 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 CPSF4LA6NMK7 179 aaKnown RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 J3KTA2 159 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 TP53I11O14683 189 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 NDUFB5O43674 189 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 BCAS1O75363 584 aaPredicted RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 DEAF1O75398 565 aaPredicted RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 F10P00742 488 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 GKN3PP0CG01 181 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 MAGEA2P43356 314 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 RPP38P78345 283 aaKnown RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 OC90Q02509 493 aaPredicted RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 SLC34A1Q06495 639 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 GANABQ14697 944 aaKnown RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 TRIP10Q15642 601 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 ATP6AP1Q15904 470 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 SNCBQ16143 134 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 NTRK2Q16620 822 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 LINC00696Q6ZRV3 163 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 NUP54Q7Z3B4 507 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 RANBP3LQ86VV4 465 aaPredicted RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 CMIPQ8IY22 773 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 LILRA2Q8N149 483 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 CYP4Z2PQ8N1L4 340 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 OR6T1Q8NGN1 323 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 SH3YL1Q96HL8 342 aaPredicted RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 WFDC6Q9BQY6 131 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 ING2Q9H160 280 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 IL1RAPQ9NPH3 570 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 ANKRD10Q9NXR5 420 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 DNAJB12Q9NXW2 375 aaKnown RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 C6orf203Q9P0P8 240 aaPredicted RBP12.96□□□□□ -0.33
CD4-208ENST00000538827 RIMS3Q9UJD0 308 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 SLC35A3Q9Y2D2 325 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 CHST2Q9Y4C5 530 aa12.96□□□□□ -0.33
CD4-208ENST00000538827 MED13Q9UHV7 2174 aa12.96□□□□□ -0.34
CD4-208ENST00000538827 TEX15Q9BXT5 2789 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 SAC3D1A6NKF1 404 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 CLOCKO15516 846 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 OIP5O43482 229 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 E2F6O75461 281 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 DNAJB5O75953 348 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 NGFRP08138 427 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 RRM2P31350 389 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 CCL11P51671 97 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 TAS2R41P59536 307 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 CXADRP78310 365 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 NPTX1Q15818 432 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 ZNF791Q3KP31 576 aaPredicted RBP12.95□□□□□ -0.34
CD4-208ENST00000538827 KLHL26Q53HC5 615 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 PRAMEF20Q5VT98 475 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 BROXQ5VW32 411 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 BICRALQ6AI39 1079 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 OR2T5Q6IEZ7 315 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 H3F3CQ6NXT2 135 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 APOOLQ6UXV4 268 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 CCDC81Q6ZN84 652 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 SPACA3Q8IXA5 215 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 DND1Q8IYX4 353 aaKnown RBP12.95□□□□□ -0.34
CD4-208ENST00000538827 OR2T29Q8NH02 315 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 GRHL3Q8TE85 626 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 APOBEC4Q8WW27 367 aaKnown RBP12.95□□□□□ -0.34
CD4-208ENST00000538827 OIT3Q8WWZ8 545 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 PSMF1Q92530 271 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 TTC9Q92623 222 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 C7orf34Q96L11 122 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 ZNF300Q96RE9 604 aaPredicted RBP12.95□□□□□ -0.34
CD4-208ENST00000538827 MCHR1Q99705 422 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 AGPAT4Q9NRZ5 378 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 NDUFAF4Q9P032 175 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 DNAJB9Q9UBS3 223 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 TESQ9UGI8 421 aaKnown RBP12.95□□□□□ -0.34
CD4-208ENST00000538827 CARD8Q9Y2G2 431 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 NTNG1Q9Y2I2 539 aa12.95□□□□□ -0.34
CD4-208ENST00000538827 EML6Q6ZMW3 1958 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 A0A1W2PQD3 144 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 C17orf51A8MQB3 221 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 ALG1L2C9J202 215 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 ZNF264O43296 627 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 HCRTR2O43614 444 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 FADS1O60427 444 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 ANGPTL1O95841 491 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 PRG2P13727 222 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 ZNF23P17027 643 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 RYKP34925 604 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 CDH12P55289 794 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 PLAURQ03405 335 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 TLE3Q04726 772 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 PPP1R8Q12972 351 aaKnown RBP12.94□□□□□ -0.34
CD4-208ENST00000538827 ZSWIM7Q19AV6 140 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 CRTC2Q53ET0 693 aaPredicted RBP12.94□□□□□ -0.34
CD4-208ENST00000538827 ZNF468Q5VIY5 522 aaPredicted RBP12.94□□□□□ -0.34
CD4-208ENST00000538827 FNDC7Q5VTL7 733 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 LPCAT4Q643R3 524 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 RTL4Q6ZR62 310 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms