RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 IL10RAQ13651 578 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 ZNF345Q14585 488 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 GINS1Q14691 196 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 EOGTQ5NDL2 527 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 DNLZQ5SXM8 178 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 UBXN11Q5T124 520 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 ZNF648Q5T619 568 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 IDNKQ5T6J7 187 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 PRAMEF8Q5VWM4 474 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 PRAMEF7Q5VXH5 474 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 ZDHHC20Q5W0Z9 365 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 ZNF626Q68DY1 528 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 GRHL2Q6ISB3 625 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 C3orf33Q6P1S2 294 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SFXN4Q6P4A7 337 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 HAGHLQ6PII5 290 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 FAM111BQ6SJ93 734 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 ASB18Q6ZVZ8 466 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 CXXC5Q7LFL8 322 aaKnown RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 TRMT11Q7Z4G4 463 aaKnown RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 SCD5Q86SK9 330 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 GID4Q8IVV7 300 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SIAH3Q8IW03 269 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 FAM217AQ8IXS0 508 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 GPR135Q8IZ08 494 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 OR4N4Q8N0Y3 316 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SAMD12Q8N8I0 201 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 NFKBIDQ8NI38 313 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 WDR20Q8TBZ3 569 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SFT2D1Q8WV19 159 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 OSTF1Q92882 214 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 NKD1Q969G9 470 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TMEM203Q969S6 136 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 ZNF668Q96K58 619 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 ZNF354BQ96LW1 612 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 C12orf66Q96MD2 445 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 FERD3LQ96RJ6 166 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 DDOQ99489 341 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 MNTQ99583 582 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 GAL3ST1Q99999 423 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SLC35A5Q9BS91 424 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 C16orf70Q9BSU1 422 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SPON2Q9BUD6 331 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SARGQ9BW04 601 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 APOL5Q9BWW9 433 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 TM6SF2Q9BZW4 377 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 DUSP15Q9H1R2 295 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 SLC38A1Q9H2H9 487 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 C8orf33Q9H7E9 229 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 RNF122Q9H9V4 155 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TCF7L1Q9HCS4 588 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 MYNNQ9NPC7 610 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TMEM138Q9NPI0 162 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SPHK1Q9NYA1 384 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TVP23BQ9NYZ1 205 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 PTGFRNQ9P2B2 879 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 ASH2LQ9UBL3 628 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 DUSP13Q9UII6 198 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TINAGQ9UJW2 476 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 GJD2Q9UKL4 321 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TRBV4-1A0A0J9YWV2 114 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 CXorf51AA0A1B0GTR3 108 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 MBLAC1A4D2B0 266 aaPredicted RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 SLC22A31A6NKX4 558 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 C2orf74A8MZ97 194 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 GFYI3L273 518 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 M0QZQ0 153 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 FOXE1O00358 373 aaPredicted RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 ZNF197O14709 1029 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 PLPP2O43688 288 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 LANCL1O43813 399 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 NME6O75414 186 aaPredicted RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 KHDRBS3O75525 346 aaKnown RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 GATBO75879 557 aaKnown RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 ARL6IP5O75915 188 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 SLC25A14O95258 325 aaPredicted RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 GUCA1CO95843 209 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 PLATP00750 562 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 RPLP2P05387 115 aaKnown RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 EIF4EP06730 217 aaKnown RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 GP1BAP07359 652 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 MELTFP08582 738 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 DDX6P26196 483 aaKnown RBP eCLIP6.24□□□□□ -1.41
USP28-207ENST00000538475 AOAHP28039 575 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 HTR2AP28223 471 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 HTR1FP30939 366 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 OR1E1P30953 314 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 TIA1P31483 386 aaKnown RBP eCLIP6.24□□□□□ -1.41
USP28-207ENST00000538475 GDNFP39905 211 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 NSG1P42857 185 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 GPR15P49685 360 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 SELENOPP49908 381 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 ANXA11P50995 505 aaKnown RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 ARFIP1P53367 373 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 CXADRP78310 365 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 CAP1Q01518 475 aa6.24□□□□□ -1.41
USP28-207ENST00000538475 SSBP1Q04837 148 aaKnown RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 SRSF4Q08170 494 aaKnown RBP6.24□□□□□ -1.41
USP28-207ENST00000538475 ILF3Q12906 894 aaKnown RBP eCLIP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms