RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 HCRTR1O43613 425 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 WDR1O75083 606 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CPSF4O95639 269 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TOP3BO95985 862 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 C8BP07358 591 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF17P17021 662 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SLC6A2P23975 617 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 GTF2E2P29084 291 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 FRKP42685 505 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 HYAL2Q12891 473 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SLC10A1Q14973 349 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 OR1C1Q15619 314 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 COL28A1Q2UY09 1125 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 AGKQ53H12 422 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 VWA2Q5GFL6 755 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SAMD4BQ5PRF9 694 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 THEM4Q5T1C6 240 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CYB5R2Q6BCY4 276 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 DCDC5Q6ZRR9 648 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF621Q6ZSS3 439 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 OR2L13Q8N349 312 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SLC43A2Q8N370 569 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 FAM109AQ8N4B1 249 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 KLHL36Q8N4N3 616 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ARHGEF39Q8N4T4 335 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 METTL27Q8N6F8 245 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 HIPK4Q8NE63 616 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PHF10Q8WUB8 498 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ST8SIA1Q92185 356 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ELP4Q96EB1 424 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NEURL3Q96EH8 262 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 APIPQ96GX9 242 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CDK15Q96Q40 435 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PIGQQ9BRB3 760 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 LDAHQ9H6V9 325 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 FOLH1BQ9HBA9 442 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM27Q9HBJ8 222 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ZFP64Q9NPA5 681 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 EXOSC3Q9NQT5 275 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 STARD5Q9NSY2 213 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 OLAHQ9NV23 265 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MAT2BQ9NZL9 334 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 EXTL2Q9UBQ6 330 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PRPF19Q9UMS4 504 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TAF4O00268 1085 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SYT5O00445 386 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NKX2-8O15522 239 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 FGF17O60258 216 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NME2P1O60361 137 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NRP2O60462 931 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 EEDO75530 441 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SLC25A12O75746 678 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 UMODP07911 640 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 THBS1P07996 1170 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SP1P08047 785 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SBK3P0C264 359 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 GP1BBP13224 206 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ABOP16442 354 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MATN1P21941 496 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NME2P22392 152 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CALB2P22676 271 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 SRD5A2P31213 254 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 GNG10P50151 68 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ATP12AP54707 1039 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CSNK2A1P68400 391 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MAT1AQ00266 395 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 GAB1Q13480 694 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NTRK2Q16620 822 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CYP51A1Q16850 503 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF674Q2M3X9 581 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CLEC6AQ6EIG7 209 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 VN1R5Q7Z5H4 357 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ABHD12BQ7Z5M8 362 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 DHDDSQ86SQ9 333 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF605Q86T29 641 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CDK20Q8IZL9 346 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 LNX2Q8N448 690 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 EXD3Q8N9H8 876 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ST6GALNAC3Q8NDV1 305 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 FAM13CQ8NE31 585 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CHDHQ8NE62 594 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 OR1J4Q8NGS1 313 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CAPSLQ8WWF8 208 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PROX1Q92786 737 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 DIO2Q92813 273 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 ANKRD9Q96BM1 317 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 PPM1MQ96MI6 270 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CNTNAP3BQ96NU0 1288 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM120AQ9BXJ8 343 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CNTNAP3Q9BZ76 1288 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TP63Q9H3D4 680 aaPredicted RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 KLHL31Q9H511 634 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MLXIPLQ9NP71 852 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 IL17BQ9UHF5 180 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 AP4B1Q9Y6B7 739 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 LRRK1Q38SD2 2015 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 GOLGA4Q13439 2230 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 GVINP1Q7Z2Y8 2422 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 A8MUA0 341 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms