RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 PDK3Q15120 406 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 SPDYAQ5MJ70 313 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 LRIG3Q6UXM1 1119 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 Q6ZT83 130 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF551Q7Z340 670 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 HIPK1Q86Z02 1210 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 OR5M1Q8NGP8 315 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 GPR151Q8TDV0 419 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 OSTF1Q92882 214 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 TRMT61AQ96FX7 289 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 RADILQ96JH8 1075 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 MRGPRX4Q96LA9 322 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 BTBD2Q9BX70 525 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 TRIM2Q9C040 744 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 PIGUQ9H490 435 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 ESRP2Q9H6T0 727 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 TMEM160Q9NX00 188 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 PSMC3IPQ9P2W1 217 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 ATP6V1HQ9UI12 483 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 ING1Q9UK53 422 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 PRDM4Q9UKN5 801 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 RNF115Q9Y4L5 304 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 NUP214P35658 2090 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 A0A096LNT2 108 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF724A8MTY0 619 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 PLIN3O60664 434 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 GLRA3O75311 464 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 SYNGR4O95473 234 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 PLGP00747 810 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 PLAUP00749 431 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 ACP2P11117 423 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 PYGBP11216 843 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 COX5AP20674 150 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 ASMTP46597 345 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 CCT5P48643 541 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF41P51814 821 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 C21orf58P58505 322 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 STX5Q13190 355 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 ITGADQ13349 1161 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 TAB1Q15750 504 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 DUSP5Q16690 384 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 PGGHGQ32M88 737 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF672Q499Z4 452 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 SH2D4BQ5SQS7 431 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 TEX35Q5T0J7 233 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 ANKRD34AQ69YU3 496 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 HBMQ6B0K9 141 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 R3HCC1LQ7Z5L2 792 aaKnown RBP9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 LILRA2Q8N149 483 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 NUP43Q8NFH3 380 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 B4GALNT2Q8NHY0 566 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 PIK3R3Q92569 461 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 AKAP1Q92667 903 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 FBXW5Q969U6 566 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 S100PBPQ96BU1 408 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 RNF145Q96MT1 663 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 NPAS1Q99742 590 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 POTEKPQ9BYX7 375 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 PRRG4Q9BZD6 226 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 TNFRSF12AQ9NP84 129 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 SIRT3Q9NTG7 399 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 VDAC3Q9Y277 283 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 POLR3HQ9Y535 204 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 CUBNO60494 3623 aa9.97□□□□□ -0.81
CLSTN3-206ENST00000535668 SVEP1Q4LDE5 3571 aa9.96□□□□□ -0.81
CLSTN3-206ENST00000535668 CR1P17927 2039 aa9.96□□□□□ -0.81
CLSTN3-206ENST00000535668 IGKV3D-15A0A087WSY6 115 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF814B7Z6K7 855 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 DYNC1I1O14576 645 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 LSM1O15116 133 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 CD5LO43866 347 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 EIF4E2O60573 245 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 SEC22BO75396 215 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 PRKD3O94806 890 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 FESP07332 822 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 SOD3P08294 240 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 MYL2P10916 166 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 SDC1P18827 310 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 PCSK6P29122 969 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 RPL3P39023 403 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 OR3A2P47893 321 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 P2RX1P51575 399 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 BTKQ06187 659 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 CD226Q15762 336 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 IMPG1Q17R60 797 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 CLEC12BQ2HXU8 276 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 UGT3A2Q3SY77 523 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 RFTN2Q52LD8 501 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF385BQ569K4 471 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 FIGNL1Q6PIW4 674 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 ZAR1Q86SH2 424 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 GPR119Q8TDV5 335 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 SMAP2Q8WU79 429 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 IFT81Q8WYA0 676 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 PPCDCQ96CD2 204 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 FAM120BQ96EK7 910 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 ZC3HAV1LQ96H79 300 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 BOD1Q96IK1 185 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 TRAF4Q9BUZ4 470 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms