RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ZSCAN30	Q86W11	494 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLC13A5	Q86YT5	568 aa	Predicted RBP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SAMD14	Q8IZD0	417 aa	Predicted RBP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	LRRC52	Q8N7C0	313 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NOA1	Q8NC60	698 aa	Known RBP	3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ANKRD20A12P	Q8NF67	263 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FAM57A	Q8TBR7	257 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ALG14	Q96F25	216 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PGM2	Q96G03	612 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ATG101	Q9BSB4	218 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OSBPL8	Q9BZF1	889 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR2B2	Q9GZK3	357 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ATG10	Q9H0Y0	220 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PALMD	Q9NP74	551 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PKD2L2	Q9NZM6	624 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442	VPS54	Q9P1Q0	977 aa		3.88	□□□□□ -1.79
ECHDC1-223	ENST00000534442		A0A0B4J203	849 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442		A0A1B0GUV1	79 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PP2D1	A8MPX8	630 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KPNA3	O00505	521 aa	Predicted RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	MCF2L	O15068	1137 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ALOX15B	O15296	676 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ATP6V0E1	O15342	81 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GLCE	O94923	617 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	MOCS2	O96007	188 aa	Predicted RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PNP	P00491	289 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	APOH	P02749	345 aa	Predicted RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CAPN1	P07384	714 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C8orf89	P0DMQ9	161 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	T-ENOL	P0DO92	83 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IGHV4-38-2	P0DP08	117 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF18	P17022	549 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PIK3R1	P27986	724 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	MAGEB1	P43366	347 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IER3	P46695	156 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SGSH	P51688	502 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GFER	P55789	205 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	AKAP17A	Q02040	695 aa	Known RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RBBP7	Q16576	425 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GPR33	Q49SQ1	333 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TECRL	Q5HYJ1	363 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SPSB3	Q6PJ21	355 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C9orf139	Q6ZV77	190 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ANKRD46	Q86W74	232 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZDHHC17	Q8IUH5	632 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	METTL27	Q8N6F8	245 aa	Predicted RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KLHDC1	Q8N7A1	406 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF383	Q8NA42	475 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DMBX1	Q8NFW5	382 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR8H1	Q8NGG4	311 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	UBLCP1	Q8WVY7	318 aa	Predicted RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HAS2	Q92819	552 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	THOC3	Q96J01	351 aa	Known RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	MARK4	Q96L34	752 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RHNO1	Q9BSD3	238 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	WAC	Q9BTA9	647 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLITRK2	Q9H156	845 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RIMS4	Q9H426	269 aa	Predicted RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	UPF2	Q9HAU5	1272 aa	Known RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DMAP1	Q9NPF5	467 aa	Predicted RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FAM207A	Q9NSI2	230 aa	Predicted RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SAMSN1	Q9NSI8	373 aa	Known RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TRPC4	Q9UBN4	977 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SCML2	Q9UQR0	700 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RUVBL2	Q9Y230	463 aa	Known RBP	3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ATP8B3	O60423	1300 aa		3.87	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PKHD1	P08F94	4074 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PLEC	Q15149	4684 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TMEM150C	B9EJG8	249 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OVOL3	O00110	214 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CDC7	O00311	574 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CLDN5	O00501	218 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	VEGFD	O43915	354 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KLK3	P07288	261 aa	Predicted RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RALA	P11233	206 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	F3	P13726	295 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	STMN1	P16949	149 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF30	P17039	623 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TPSB2	P20231	275 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CYP2A7	P20853	494 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	WARS	P23381	471 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SSTR1	P30872	391 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ACOT2	P49753	483 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NUMB	P49757	651 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IL10RB	Q08334	325 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TRAP1	Q12931	704 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NPRL3	Q12980	569 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CBX3	Q13185	183 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NCF4	Q15080	339 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TPSAB1	Q15661	275 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF585B	Q52M93	769 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLC25A53	Q5H9E4	307 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLC35D3	Q5M8T2	416 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PRAMEF8	Q5VWM4	474 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GPR141	Q7Z602	305 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	EXOC3L1	Q86VI1	746 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KLHDC8A	Q8IYD2	350 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	BLID	Q8IZY5	108 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TMEM161B	Q8NDZ6	487 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	LPCAT1	Q8NF37	534 aa		3.86	□□□□□ -1.79

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