RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 SEMA5AQ13591 1074 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GK3PQ14409 553 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GPR176Q14439 515 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GRB14Q14449 540 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FCN2Q15485 313 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 OR8G1Q15617 311 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SNAPC1Q16533 368 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 MPEG1Q2M385 716 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 KHDC1LQ5JSQ8 128 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 STEAP4Q687X5 459 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 LEMD1Q68G75 181 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 OR8G2PQ6IF36 304 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 OR6B2Q6IFH4 312 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FAHD2BQ6P2I3 314 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 PLET1Q6UQ28 207 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 PET117Q6UWS5 81 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 TMEM107Q6UX40 140 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 ISLR2Q6UXK2 745 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FAM151BQ6UXP7 276 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 C17orf107Q6ZR85 190 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SLC46A3Q7Z3Q1 461 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GRINAQ7Z429 371 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 NRARPQ7Z6K4 114 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 RANBP3LQ86VV4 465 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 CRLF3Q8IUI8 442 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 MFSD6LQ8IWD5 586 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FAM89BQ8N5H3 189 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 BANPQ8N9N5 519 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 OR51D1Q8NGF3 324 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 OR51L1Q8NGJ5 315 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 OR8D4Q8NGM9 314 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 OR5K1Q8NHB7 308 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FIBINQ8TAL6 211 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 BRIX1Q8TDN6 353 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 ZNF431Q8TF32 576 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 C16orf78Q8WTQ4 265 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FBXO32Q969P5 355 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SLAMF9Q96A28 289 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 LGALS12Q96DT0 336 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 ARSGQ96EG1 525 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 LRRC46Q96FV0 321 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 AURKBQ96GD4 344 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 FAHD2AQ96GK7 314 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SMIM8Q96KF7 97 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SLC38A2Q96QD8 506 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FYTTD1Q96QD9 318 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 STACQ99469 402 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GPR20Q99678 358 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 MEIS3Q99687 375 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 MAP3K3Q99759 626 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FUZQ9BT04 418 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 NAA50Q9GZZ1 169 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 FAM49AQ9H0Q0 323 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 POLR3FQ9H1D9 316 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 PPIL3Q9H2H8 161 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 CLMPQ9H6B4 373 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 TMEM138Q9NPI0 162 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 ENTPD7Q9NQZ7 604 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SLC2A4RGQ9NR83 387 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 RRP7BPQ9NSQ0 103 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SIDT1Q9NXL6 827 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 SMPD3Q9NY59 655 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 COQ3Q9NZJ6 369 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 OPN4Q9UHM6 478 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 ZNF490Q9ULM2 529 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 NDRG2Q9UN36 371 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 MMP24Q9Y5R2 645 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 CHD5Q8TDI0 1954 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FAM205AQ6ZU69 1335 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 NRKQ7Z2Y5 1582 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 ALKQ9UM73 1620 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 RGPD8O14715 1765 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 RGPD5Q99666 1765 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 C7orf66A4D0T2 115 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 POM121BA6NF01 834 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SERPINE3A8MV23 424 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SEC14L6B5MCN3 397 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 C1QTNF3-AMACRE9PGA6 284 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 NPIPA7E9PJI5 369 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CLIC2O15247 247 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ARPC5O15511 151 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 PPIHO43447 177 aaKnown RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 SSX4O60224 188 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 LYPLA1O75608 230 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 AQP8O94778 261 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 FGBP02675 491 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 MT-ND4LP03901 98 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 NPIPA8P0DM63 369 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ALPPL2P10696 532 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CCL2P13500 99 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ZNF25P17030 456 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 RCC1P18754 421 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 CD72P21854 359 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 PCMT1P22061 227 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 EPHA3P29320 983 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 C21orf33P30042 268 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 NNMTP40261 264 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 RPL21P46778 160 aaKnown RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 RABIFP47224 123 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CDX1P47902 265 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms