RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 DTNAQ9Y4J8 743 aa27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 TNFSF12-TNFSF13A0A0A6YY99 330 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 A0A1W2PNV4 684 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 TNFSF13O75888 250 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 PSMA4P25789 261 aaKnown RBP27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 IL12AP29459 219 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 CASP9P55211 416 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 ARHGAP11BQ3KRB8 267 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 NXNQ6DKJ4 435 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 LUZP2Q86TE4 346 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 TMEM200AQ86VY9 491 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 PIWIL2Q8TC59 973 aaKnown RBP27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 ZNF845Q96IR2 970 aaPredicted RBP27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 MAELQ96JY0 434 aaKnown RBP27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 RNF145Q96MT1 663 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 CCDC115Q96NT0 180 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 EXD2Q9NVH0 621 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 CARD8Q9Y2G2 431 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 OTOGQ6ZRI0 2925 aa27.26■■□□□ 1.95
SSSCA1-207ENST00000533115 OIP5O43482 229 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 PON3Q15166 354 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 SLC9B1Q4ZJI4 515 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 SAXO2Q658L1 398 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 CBLN3Q6UW01 205 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 ZNF614Q8N883 585 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 FNDC9Q8TBE3 224 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 POC1BQ8TC44 478 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 RBM24Q9BX46 236 aaKnown RBP27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 NMUR2Q9GZQ4 415 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 PACSIN3Q9UKS6 424 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 ICAM5Q9UMF0 924 aa27.25■■□□□ 1.95
SSSCA1-207ENST00000533115 C9JVG2 144 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 GTPBP1O00178 669 aaKnown RBP27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 EIF1AYO14602 144 aaKnown RBP27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 STX11O75558 287 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 AGR2O95994 175 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 LINGO3P0C6S8 592 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 P2RX1P51575 399 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 RAC1P63000 192 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 SORDQ00796 357 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 SGCBQ16585 318 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 C16orf62Q7Z3J2 963 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 MAVSQ7Z434 540 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 FAM222BQ8WU58 562 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 NEURL3Q96EH8 262 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 ZBTB18Q99592 522 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 SLC35A5Q9BS91 424 aa27.24■■□□□ 1.95
SSSCA1-207ENST00000533115 FCMRO60667 390 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 PGRP06401 933 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 OR12D1P0DN82 309 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 CHI3L1P36222 383 aaPredicted RBP27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 EIF1P41567 113 aaKnown RBP27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 CPA2P48052 419 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 SUMO3P55854 103 aaPredicted RBP27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 GPR68Q15743 365 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 PDZK1Q5T2W1 519 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 HEPHL1Q6MZM0 1159 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 TNFAIP8L2Q6P589 184 aaPredicted RBP27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 CNEP1R1Q8N9A8 125 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 GLB1L3Q8NCI6 653 aaPredicted RBP27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 XAGE5Q8WWM1 108 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 ATP6V1G3Q96LB4 118 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 OR52E6Q96RD3 313 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 ZNF350Q9GZX5 532 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 RNF122Q9H9V4 155 aa27.23■■□□□ 1.95
SSSCA1-207ENST00000533115 TUBAL3A6NHL2 446 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 ZNF195O14628 629 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 NUDT14O95848 222 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 IDO1P14902 403 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 EIF1AXP47813 144 aaKnown RBP27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 LRRC74AQ0VAA2 488 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 ZNF141Q15928 474 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 ATAD3BQ5T9A4 648 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 CDH24Q86UP0 819 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 STARD4Q96DR4 205 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 ADGRG7Q96K78 797 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 PANX1Q96RD7 426 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 GALNT8Q9NY28 637 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 MKLN1Q9UL63 735 aa27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 ANKRD17O75179 2603 aaKnown RBP27.22■■□□□ 1.95
SSSCA1-207ENST00000533115 A8MXE2 369 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 EIF4E2O60573 245 aaKnown RBP27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 OPN1LWP04000 364 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 FCGR2AP12318 317 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 ME2P23368 584 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 KHKP50053 298 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 FOXF1Q12946 379 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 CTU2Q2VPK5 515 aaKnown RBP27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 NDUFAF6Q330K2 333 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 PDCD4Q53EL6 469 aaKnown RBP27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 VWA1Q6PCB0 445 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 OLIG3Q7RTU3 272 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 TRIML2Q8N7C3 387 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 OR10D3Q8NH80 312 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 GPR119Q8TDV5 335 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 RAB8BQ92930 207 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 PAQR5Q9NXK6 330 aaPredicted RBP27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 KCNE5Q9UJ90 142 aa27.21■■□□□ 1.95
SSSCA1-207ENST00000533115 AKAP9Q99996 3911 aa27.2■■□□□ 1.95
SSSCA1-207ENST00000533115 SERINC4A6NH21 518 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms