RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 G3V2L1 256 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 OR7A17O14581 309 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 ADAMDEC1O15204 470 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 TRIM13O60858 407 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 CD8AP01732 235 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 TROVE2P10155 538 aaKnown RBP eCLIP11.06□□□□□ -0.64
CAPN1-223ENST00000533079 NEFHP12036 1026 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 ZNF16P17020 682 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-223ENST00000533079 ME2P23368 584 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 ALDH3A1P30838 453 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 CDH11P55287 796 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 DNAJB13P59910 316 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 PSG6Q00889 435 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 C17orf67Q0P5P2 114 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 BST1Q10588 318 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 ZNF155Q12901 538 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-223ENST00000533079 P2RY6Q15077 328 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 RNPS1Q15287 305 aaKnown RBP11.06□□□□□ -0.64
CAPN1-223ENST00000533079 CHI3L2Q15782 390 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 DECR1Q16698 335 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 SPDYAQ5MJ70 313 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 PDSS1Q5T2R2 415 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 LIPNQ5VXI9 398 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 ALKBH2Q6NS38 261 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 KLC3Q6P597 504 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 SEZ6L2Q6UXD5 910 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 ZYG11AQ6WRX3 759 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 GALNT10Q86SR1 603 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 OR9A2Q8NGT5 310 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 OR2V1Q8NHB1 315 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 PROX1Q92786 737 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 NEUROG1Q92886 237 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 KISS1RQ969F8 398 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-223ENST00000533079 ZBTB8AQ96BR9 441 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 NXNL1Q96CM4 212 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 CCDC126Q96EE4 140 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 C12orf49Q9H741 205 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 NOL11Q9H8H0 719 aaKnown RBP11.06□□□□□ -0.64
CAPN1-223ENST00000533079 SLCO1B3Q9NPD5 702 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 OXSMQ9NWU1 459 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 CISD1Q9NZ45 108 aaKnown RBP11.06□□□□□ -0.64
CAPN1-223ENST00000533079 KCNS2Q9ULS6 477 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 TMCO1Q9UM00 188 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 SLC12A4Q9UP95 1085 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 B3GALT5Q9Y2C3 310 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 TMEM114B3SHH9 223 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 LMX1BO60663 402 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 SERPINB5P36952 375 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 GZMKP49863 264 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 RAC1P63000 192 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 PRR5P85299 388 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 RUNX1T1Q06455 604 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 TRAF3Q13114 568 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 SQLEQ14534 574 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 PCLAFQ15004 111 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 TCHHL1Q5QJ38 904 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-223ENST00000533079 TMEM201Q5SNT2 666 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 FAM166AQ6J272 317 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 TFAP2EQ6VUC0 442 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 CCDC116Q8IYX3 515 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 FAM9CQ8IZT9 166 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 GTPBP8Q8N3Z3 284 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-223ENST00000533079 CCDC63Q8NA47 563 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 OR4N2Q8NGD1 307 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 RNF128Q8TEB7 428 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 DUSP19Q8WTR2 217 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 KCTD4Q8WVF5 259 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 STON2Q8WXE9 905 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 TBL1XR1Q9BZK7 514 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 MRPL46Q9H2W6 279 aaKnown RBP11.05□□□□□ -0.64
CAPN1-223ENST00000533079 ANKRA2Q9H9E1 313 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 Q9N2J8 555 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 FBXO34Q9NWN3 711 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 KLHL13Q9P2N7 655 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 MCM8Q9UJA3 840 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 USH1CQ9Y6N9 552 aa11.05□□□□□ -0.64
CAPN1-223ENST00000533079 A0A087WV62 115 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 GOLGA8QA0A0J9YX86 632 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 GOLGA8OA6NCC3 632 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 GOLGA8NF8WBI6 632 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 STX16-NPEPL1H3BU86 382 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 H7C417 338 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 STX16O14662 325 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 CXCL13O43927 109 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 SIX3O95343 332 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-223ENST00000533079 ESRRBO95718 433 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 IL33O95760 270 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 SBK3P0C264 359 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 IGHV4-31P0DP07 118 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 MYL2P10916 166 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 HSD3B1P14060 373 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 IGFBP5P24593 272 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 HSD3B2P26439 372 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 MPIP34949 423 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 GSTM5P46439 218 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 NAA20P61599 178 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 IRF9Q00978 393 aa11.04□□□□□ -0.64
CAPN1-223ENST00000533079 ITGADQ13349 1161 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms