RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 FBXW5Q969U6 566 aa14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 CPNE4Q96A23 557 aaPredicted RBP14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 GIMAP5Q96F15 307 aa14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 TRMT61AQ96FX7 289 aaKnown RBP14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 ZNF764Q96H86 408 aaPredicted RBP14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 METTL2AQ96IZ6 378 aaKnown RBP14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 MDFIQ99750 246 aa14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 REPIN1Q9BWE0 567 aaKnown RBP14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 C12orf65Q9H3J6 166 aaKnown RBP14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 ACSS1Q9NUB1 689 aaPredicted RBP14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 ZNF701Q9NV72 531 aaPredicted RBP14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 FBXO34Q9NWN3 711 aa14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 KLHL13Q9P2N7 655 aa14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 BAIAP2L1Q9UHR4 511 aa14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 MID2Q9UJV3 735 aa14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 ARID1AO14497 2285 aa14.11□□□□□ -0.15
CHMP4A-204ENST00000530996 NPIPA5A0A0B4J1W7 369 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 RNF223E7ERA6 249 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 NPIPA7E9PJI5 369 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 H3BNH8 94 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 NTN1O95631 604 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 TP53P04637 393 aaPredicted RBP14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 CD3EP07766 207 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 NPIPA8P0DM63 369 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 PRPH2P23942 346 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 SHC1P29353 583 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 SLC7A1P30825 629 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 ASMTP46597 345 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 FAPQ12884 760 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 TNK1Q13470 666 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 TP53BP2Q13625 1128 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 KIAA0040Q15053 153 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 RNPS1Q15287 305 aaKnown RBP14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 STK11Q15831 433 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 CLEC12BQ2HXU8 276 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 TFAP2EQ6VUC0 442 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 TUSC5Q8IXB3 177 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 MAPK1IP1LQ8NDC0 245 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 OR2T11Q8NH01 316 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 RFWD2Q8NHY2 731 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 POC1BQ8TC44 478 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 C16orf58Q96GQ5 468 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 KLHDC3Q9BQ90 382 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 BTBD2Q9BX70 525 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 SRXN1Q9BYN0 137 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 OR10A4Q9H209 315 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 ESRP2Q9H6T0 727 aaKnown RBP14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 NGBQ9NPG2 151 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 OXSMQ9NWU1 459 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 CCL27Q9Y4X3 112 aa14.1□□□□□ -0.15
CHMP4A-204ENST00000530996 A0A1W2PP18 115 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 A0A1W2PQD3 144 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 GTPBP1O00178 669 aaKnown RBP14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 HSPA4LO95757 839 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 PAX1P15863 534 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 PSMA4P25789 261 aaKnown RBP14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 CDKN1AP38936 164 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 MAP3K8P41279 467 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 PDE7AQ13946 482 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 CDC73Q6P1J9 531 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 LRIG3Q6UXM1 1119 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 FCRLAQ7L513 359 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 NUFIP2Q7Z417 695 aaKnown RBP14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 R3HCC1LQ7Z5L2 792 aaKnown RBP14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 C10orf107Q8IVU9 208 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 C4orf33Q8N1A6 199 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 FBXO27Q8NI29 283 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 UBLCP1Q8WVY7 318 aaPredicted RBP14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 HOXB13Q92826 284 aaPredicted RBP14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 FAM120BQ96EK7 910 aaKnown RBP14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 TMEM204Q9BSN7 226 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 CARD8Q9Y2G2 431 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 TMED5Q9Y3A6 229 aa14.09□□□□□ -0.15
CHMP4A-204ENST00000530996 IGHV3-15A0A0B4J1V0 119 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 TMEM114B3SHH9 223 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 LSM1O15116 133 aaKnown RBP14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 SCAMP2O15127 329 aaKnown RBP14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 TBX19O60806 448 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 HMGN2P05204 90 aaKnown RBP14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 LINGO3P0C6S8 592 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 MAPK1P28482 360 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 SOAT1P35610 550 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 TAB1Q15750 504 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 NDUFAF6Q330K2 333 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 TMEM176BQ3YBM2 270 aaPredicted RBP14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 DCST2Q5T1A1 773 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 KANK2Q63ZY3 851 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 ADAM5Q6NVV9 412 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 ZCCHC12Q6PEW1 402 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 MTERF4Q7Z6M4 381 aaKnown RBP14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 KBTBD8Q8NFY9 601 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 FAM110BQ8TC76 370 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 AGR3Q8TD06 166 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 ZFP90Q8TF47 636 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 TWIST2Q8WVJ9 160 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 IGFBPL1Q8WX77 278 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 FCRL1Q96LA6 429 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 STACQ99469 402 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 HDHD5Q9BXW7 423 aa14.08□□□□□ -0.16
CHMP4A-204ENST00000530996 POTEKPQ9BYX7 375 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms