RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 LAMP1P11279 417 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 PSMA4P25789 261 aaKnown RBP18.72■□□□□ 0.59
SMPD1-204ENST00000530395 CCT3P49368 545 aaKnown RBP18.72■□□□□ 0.59
SMPD1-204ENST00000530395 TP53BP2Q13625 1128 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 CD226Q15762 336 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 CTU2Q2VPK5 515 aaKnown RBP18.72■□□□□ 0.59
SMPD1-204ENST00000530395 HBMQ6B0K9 141 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 GTF2IRD2BQ6EKJ0 949 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 GTF2IRD2Q86UP8 949 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 STK32CQ86UX6 486 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 LRRC75A-AS1Q8N1F1 130 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 PHOSPHO1Q8TCT1 267 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 ADAMTS15Q8TE58 950 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 MOAP1Q96BY2 351 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 C18orf12Q96KH6 178 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 ROPN1BQ9BZX4 212 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-204ENST00000530395 GSX1Q9H4S2 264 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-204ENST00000530395 ANKZF1Q9H8Y5 726 aa18.72■□□□□ 0.59
SMPD1-204ENST00000530395 ROPN1Q9HAT0 212 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-204ENST00000530395 DSCAMO60469 2012 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 SKAP2O75563 359 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-204ENST00000530395 NUDT14O95848 222 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 OPN1LWP04000 364 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 PABPC4LP0CB38 370 aaKnown RBP18.71■□□□□ 0.59
SMPD1-204ENST00000530395 IL11P20809 199 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 ELK4P28324 431 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 ACKR1Q16570 336 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 C6orf136Q5SQH8 315 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 IL23RQ5VWK5 629 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 ANKRD34AQ69YU3 496 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 C20orf204Q6ZNR8 217 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 PSMA8Q8TAA3 256 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 SFXN5Q8TD22 340 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 KLHL15Q96M94 604 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 CCL19Q99731 98 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 NPAS1Q99742 590 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 TIGARQ9NQ88 270 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 HEATR5AQ86XA9 2040 aa18.71■□□□□ 0.59
SMPD1-204ENST00000530395 A0A0J9YW62 118 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 GJE1A6NN92 205 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 LINGO3P0C6S8 592 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 PRPS1L1P21108 318 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 ADSLP30566 484 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-204ENST00000530395 ZNF117Q03924 483 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 Q5PR19 223 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 DCST2Q5T1A1 773 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 BEND4Q6ZU67 534 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 KRTAP1-3Q8IUG1 177 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 LILRA2Q8N149 483 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 POC1BQ8TC44 478 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 TUBGCP3Q96CW5 907 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 REXO5Q96IC2 774 aaKnown RBP18.7■□□□□ 0.58
SMPD1-204ENST00000530395 MARK4Q96L34 752 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 BHLHE41Q9C0J9 482 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-204ENST00000530395 CXorf36Q9H7Y0 433 aa18.7■□□□□ 0.58
SMPD1-204ENST00000530395 RAI1Q7Z5J4 1906 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-204ENST00000530395 CFLARO15519 480 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 C6orf47O95873 294 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 TUBBP07437 444 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 ADH6P28332 368 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 SFTPDP35247 375 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 SUMO3P55854 103 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-204ENST00000530395 CARD18P57730 90 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 VSNL1P62760 191 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 FOXF1Q12946 379 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 MAD2L1Q13257 205 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-204ENST00000530395 BEX5Q5H9J7 111 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 BHLHB9Q6PI77 547 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 OSTF1Q92882 214 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 COQ8BQ96D53 544 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 C3orf30Q96M34 536 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 HS3ST6Q96QI5 342 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 ZDHHC2Q9UIJ5 367 aa18.69■□□□□ 0.58
SMPD1-204ENST00000530395 GTPBP1O00178 669 aaKnown RBP18.68■□□□□ 0.58
SMPD1-204ENST00000530395 BPGMP07738 259 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 INHBBP09529 407 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 HOXB4P17483 251 aaPredicted RBP18.68■□□□□ 0.58
SMPD1-204ENST00000530395 SOAT1P35610 550 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 P2RX1P51575 399 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 KLHL26Q53HC5 615 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 STAC2Q6ZMT1 411 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 KRTCAP2Q8N6L1 136 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 PPP1R14CQ8TAE6 165 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 CPNE4Q96A23 557 aaPredicted RBP18.68■□□□□ 0.58
SMPD1-204ENST00000530395 DUSP26Q9BV47 211 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 ZNF395Q9H8N7 513 aaPredicted RBP18.68■□□□□ 0.58
SMPD1-204ENST00000530395 GPATCH2Q9NW75 528 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 CARD8Q9Y2G2 431 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 ACTL7BQ9Y614 415 aa18.68■□□□□ 0.58
SMPD1-204ENST00000530395 GPC6Q9Y625 555 aaPredicted RBP18.68■□□□□ 0.58
SMPD1-204ENST00000530395 ROS1P08922 2347 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 NPIPA5A0A0B4J1W7 369 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 NPIPA7E9PJI5 369 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 THBDP07204 575 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 NPIPA8P0DM63 369 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 AGTR1P30556 359 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 ARRB2P32121 409 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 ATP12AP54707 1039 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 NR1H2P55055 460 aa18.67■□□□□ 0.58
SMPD1-204ENST00000530395 RNPS1Q15287 305 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms