RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 REM1O75628 298 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ABLIM3O94929 683 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 HMGN2P05204 90 aaKnown RBP13.66□□□□□ -0.22
CAPN1-214ENST00000528165 FCER2P06734 321 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF19P17023 458 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 HOXD10P28358 340 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 NTSP30990 170 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 STXBP1P61764 594 aaKnown RBP13.66□□□□□ -0.22
CAPN1-214ENST00000528165 SLC25A25Q6KCM7 469 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 MEIOBQ8N635 442 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 FAM71CQ8NEG0 241 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 BBS4Q96RK4 519 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 AIF1LQ9BQI0 150 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 NFKBIL1Q9UBC1 381 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-214ENST00000528165 PDCD5O14737 125 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 ARPC1BO15143 372 aaKnown RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 CTDSPLO15194 276 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 HYAL3O43820 417 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 OLFM2O95897 454 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 GIPP09681 153 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 PTNP21246 168 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 CCR9P51686 369 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 HTR4Q13639 388 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 MAPK14Q16539 360 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 C9orf131Q5VYM1 1079 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 HTR3DQ70Z44 454 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 LINGO2Q7L985 606 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF671Q8TAW3 534 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 RGMAQ96B86 450 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF764Q96H86 408 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 LCORQ96JN0 433 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 SEC22CQ9BRL7 303 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF416Q9BWM5 594 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 SLC7A5P2Q9GIP4 190 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 SLC6A15Q9H2J7 730 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 MTG2Q9H4K7 406 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 LHX9Q9NQ69 397 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 INPP5EQ9NRR6 644 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 KLHL28Q9NXS3 571 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF69Q9UC07 566 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 NTNG1Q9Y2I2 539 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 PRKAB1Q9Y478 270 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 PLXNA2O75051 1894 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 A0A0G2JN53 185 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 CXorf51AA0A1B0GTR3 108 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 FEZF1A0PJY2 475 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 GLTPD2A6NH11 291 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 LEFTY1O75610 366 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 RP2O75695 350 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 EPXP11678 715 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 EPHB3P54753 998 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 RGS8P57771 180 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 PSMA6P60900 246 aaKnown RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 RAP2BP61225 183 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF658BQ4V348 819 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 SFRP5Q5T4F7 317 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 LRFN4Q6PJG9 635 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 RPTNQ6XPR3 784 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 MBOAT2Q6ZWT7 520 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 C11orf96Q7Z7L8 435 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 LINC00518Q8N0U6 118 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 SPICQ8N5J4 248 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 SCARB1Q8WTV0 552 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 TMEM255BQ8WV15 326 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 C4orf36Q96KX1 117 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 HRASLSQ9HDD0 168 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 SLC35C2Q9NQQ7 365 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 CA10Q9NS85 328 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 AKAP7Q9P0M2 348 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-214ENST00000528165 PIPOXQ9P0Z9 390 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 TAC3Q9UHF0 121 aa13.65□□□□□ -0.22
CAPN1-214ENST00000528165 A0A1W2PPK0 400 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 MCRIP1C9JLW8 97 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 CDC42EP2O14613 210 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 FLRT2O43155 660 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 NDUFS4O43181 175 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 KLF4O43474 513 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 B3GALNT1O75752 331 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 SC5DO75845 299 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 ELFN1P0C7U0 828 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 TIMP2P16035 220 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 TAS2R38P59533 333 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 STK11Q15831 433 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 POM121L1PQ3SYA9 428 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 PRPF38BQ5VTL8 546 aaKnown RBP13.64□□□□□ -0.23
CAPN1-214ENST00000528165 SYT9Q86SS6 491 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 BVESQ8NE79 360 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 OR13C5Q8NGS8 318 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 CNOT9Q92600 299 aaKnown RBP13.64□□□□□ -0.23
CAPN1-214ENST00000528165 ZG16BQ96DA0 208 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 ORAI3Q9BRQ5 295 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 PELOQ9BRX2 385 aaKnown RBP13.64□□□□□ -0.23
CAPN1-214ENST00000528165 OR2AG1Q9H205 316 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 MCCC2Q9HCC0 563 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 KRCC1Q9NPI7 259 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-214ENST00000528165 NANSQ9NR45 359 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 PCDHB16Q9NRJ7 776 aa13.64□□□□□ -0.23
CAPN1-214ENST00000528165 SPG21Q9NZD8 308 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms